Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 AC092666.2-201ENST00000613287 246 ntBASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 AC127496.7-201ENST00000625110 1798 ntBASIC26.28■■□□□ 1.8
TTC39AQ5SRH9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 AC080038.3-201ENST00000623346 1952 ntBASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39AQ5SRH9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39AQ5SRH9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 AL034346.1-201ENST00000568244 1277 ntBASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC39AQ5SRH9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 AC079140.4-201ENST00000507448 529 ntBASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39AQ5SRH9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 AC068473.5-201ENST00000616428 2072 ntBASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.23■■□□□ 1.79
TTC39AQ5SRH9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39AQ5SRH9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 KRT18P61-201ENST00000585825 1298 ntBASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39AQ5SRH9 AC055733.4-201ENST00000638462 1354 ntBASIC26.2■■□□□ 1.79
TTC39AQ5SRH9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms