Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19■□□□□ 0.63
LRRK2Q5S007 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 AC009237.3-201ENST00000393279 1427 ntBASIC19■□□□□ 0.63
LRRK2Q5S007 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRK2Q5S007 RCN1P1-201ENST00000400413 996 ntBASIC18.99■□□□□ 0.63
LRRK2Q5S007 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRK2Q5S007 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRK2Q5S007 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRK2Q5S007 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRK2Q5S007 REXO1L12P-201ENST00000622156 912 ntBASIC18.99■□□□□ 0.63
LRRK2Q5S007 AC068587.7-201ENST00000641602 218 ntBASIC18.99■□□□□ 0.63
LRRK2Q5S007 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRK2Q5S007 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRK2Q5S007 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRK2Q5S007 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 TERF1P5-201ENST00000477545 1207 ntBASIC18.97■□□□□ 0.63
LRRK2Q5S007 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRK2Q5S007 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRRK2Q5S007 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRK2Q5S007 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 AL162412.1-201ENST00000567129 965 ntBASIC18.96■□□□□ 0.63
LRRK2Q5S007 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRK2Q5S007 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRK2Q5S007 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
LRRK2Q5S007 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRK2Q5S007 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRK2Q5S007 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms