Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNFT1Q5M7Z0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 AC087742.1-201ENST00000575880 1738 ntBASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNFT1Q5M7Z0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 AP001160.3-201ENST00000601484 763 ntBASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RNFT1Q5M7Z0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 UBE2DNL-204ENST00000602536 740 ntBASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
RNFT1Q5M7Z0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 AC137767.1-201ENST00000602918 1920 ntBASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 AC006970.2-201ENST00000450065 779 ntBASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 AC104771.1-201ENST00000603335 964 ntBASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNFT1Q5M7Z0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 MIR663A-201ENST00000385250 93 ntBASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNFT1Q5M7Z0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNFT1Q5M7Z0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms