Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC58Q4VC31 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC58Q4VC31 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC58Q4VC31 AC004687.1-201ENST00000579003 1625 ntBASIC19.14■□□□□ 0.66
CCDC58Q4VC31 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC58Q4VC31 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 AC103834.1-201ENST00000520383 144 ntBASIC19.14■□□□□ 0.65
CCDC58Q4VC31 AC103724.3-201ENST00000564481 992 ntBASIC19.14■□□□□ 0.65
CCDC58Q4VC31 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC58Q4VC31 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 YBX1P4-201ENST00000392794 808 ntBASIC19.13■□□□□ 0.65
CCDC58Q4VC31 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC58Q4VC31 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC58Q4VC31 AC005229.4-201ENST00000610085 2198 ntBASIC19.12■□□□□ 0.65
CCDC58Q4VC31 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms