Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRFAM7AQ494W8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 AC233992.3-201ENST00000607491 485 ntBASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 C11orf96-202ENST00000528572 1834 ntBASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRFAM7AQ494W8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 AC136469.2-201ENST00000623944 1028 ntBASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRFAM7AQ494W8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHRFAM7AQ494W8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 AC241377.3-202ENST00000626088 1088 ntBASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 AC241585.3-202ENST00000628937 1088 ntBASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 AC245100.8-202ENST00000629247 1058 ntBASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRFAM7AQ494W8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 KRT18P5-201ENST00000436075 1291 ntBASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 AC139530.1-201ENST00000575312 1977 ntBASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRFAM7AQ494W8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms