Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFX4Q33E94 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RFX4Q33E94 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 BX664725.1-201ENST00000438252 379 ntBASIC19.97■□□□□ 0.79
RFX4Q33E94 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RFX4Q33E94 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFX4Q33E94 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX4Q33E94 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX4Q33E94 AC092667.1-201ENST00000434301 2586 ntBASIC19.96■□□□□ 0.79
RFX4Q33E94 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX4Q33E94 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX4Q33E94 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX4Q33E94 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX4Q33E94 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RFX4Q33E94 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX4Q33E94 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX4Q33E94 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX4Q33E94 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.95■□□□□ 0.78
RFX4Q33E94 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX4Q33E94 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX4Q33E94 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX4Q33E94 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX4Q33E94 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX4Q33E94 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX4Q33E94 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RFX4Q33E94 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
RFX4Q33E94 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX4Q33E94 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX4Q33E94 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX4Q33E94 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX4Q33E94 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX4Q33E94 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX4Q33E94 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX4Q33E94 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX4Q33E94 DUX4L4-201ENST00000566884 1269 ntBASIC19.93■□□□□ 0.78
RFX4Q33E94 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX4Q33E94 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.93■□□□□ 0.78
RFX4Q33E94 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX4Q33E94 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX4Q33E94 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX4Q33E94 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX4Q33E94 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 AL157384.1-201ENST00000445995 2473 ntBASIC19.92■□□□□ 0.78
RFX4Q33E94 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX4Q33E94 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RFX4Q33E94 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RFX4Q33E94 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX4Q33E94 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX4Q33E94 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms