Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 GPX1P1-201ENST00000388829 606 ntBASIC31.32■■■□□ 2.61
SPHKAPQ2M3C7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 CYP2T1P-201ENST00000432607 1285 ntBASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 AP001160.3-201ENST00000601484 763 ntBASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC31.32■■■□□ 2.6
SPHKAPQ2M3C7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.31■■■□□ 2.6
SPHKAPQ2M3C7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.3■■■□□ 2.6
SPHKAPQ2M3C7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.3■■■□□ 2.6
SPHKAPQ2M3C7 AL121832.2-201ENST00000610979 668 ntBASIC31.3■■■□□ 2.6
SPHKAPQ2M3C7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
SPHKAPQ2M3C7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SPHKAPQ2M3C7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 AC005181.1-201ENST00000604782 1256 ntBASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SPHKAPQ2M3C7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.28■■■□□ 2.6
SPHKAPQ2M3C7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.28■■■□□ 2.6
SPHKAPQ2M3C7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.28■■■□□ 2.6
SPHKAPQ2M3C7 AC010536.3-201ENST00000620306 533 ntBASIC31.28■■■□□ 2.6
SPHKAPQ2M3C7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SPHKAPQ2M3C7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 TSPY6P-201ENST00000448518 926 ntBASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 AC007322.1-201ENST00000426983 750 ntBASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.27■■■□□ 2.6
SPHKAPQ2M3C7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SPHKAPQ2M3C7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
SPHKAPQ2M3C7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 AC013268.1-206ENST00000638368 961 ntBASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 AC112229.1-201ENST00000639295 961 ntBASIC31.24■■■□□ 2.59
SPHKAPQ2M3C7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SPHKAPQ2M3C7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 AL138781.1-201ENST00000566567 1274 ntBASIC31.22■■■□□ 2.59
SPHKAPQ2M3C7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms