Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX7Q2KHR2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RFX7Q2KHR2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RFX7Q2KHR2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.2■■□□□ 1.78
RFX7Q2KHR2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 SMUG1P1-201ENST00000590640 811 ntBASIC26.19■■□□□ 1.78
RFX7Q2KHR2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RFX7Q2KHR2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 AC004911.1-201ENST00000416316 871 ntBASIC26.18■■□□□ 1.78
RFX7Q2KHR2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.18■■□□□ 1.78
RFX7Q2KHR2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 AC092053.2-201ENST00000640557 1818 ntBASIC26.17■■□□□ 1.78
RFX7Q2KHR2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 OR7E47P-201ENST00000546390 1422 ntBASIC26.17■■□□□ 1.78
RFX7Q2KHR2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX7Q2KHR2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RFX7Q2KHR2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 AC006015.1-201ENST00000429970 570 ntBASIC26.15■■□□□ 1.78
RFX7Q2KHR2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.15■■□□□ 1.78
RFX7Q2KHR2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFX7Q2KHR2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms