Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H3Q16695 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H3Q16695 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H3Q16695 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H3Q16695 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H3Q16695 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 AF213884.3-201ENST00000563833 479 ntBASIC19.06■□□□□ 0.64
HIST3H3Q16695 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST3H3Q16695 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H3Q16695 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.05■□□□□ 0.64
HIST3H3Q16695 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST3H3Q16695 SMUG1P1-201ENST00000590640 811 ntBASIC19.05■□□□□ 0.64
HIST3H3Q16695 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H3Q16695 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST3H3Q16695 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
HIST3H3Q16695 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIST3H3Q16695 AC010542.4-201ENST00000563151 1910 ntBASIC19.04■□□□□ 0.64
HIST3H3Q16695 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST3H3Q16695 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST3H3Q16695 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.04■□□□□ 0.64
HIST3H3Q16695 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.04■□□□□ 0.64
HIST3H3Q16695 AL034346.1-201ENST00000568244 1277 ntBASIC19.04■□□□□ 0.64
HIST3H3Q16695 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST3H3Q16695 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.04■□□□□ 0.64
HIST3H3Q16695 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H3Q16695 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST3H3Q16695 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST3H3Q16695 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST3H3Q16695 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.02■□□□□ 0.64
HIST3H3Q16695 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST3H3Q16695 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HIST3H3Q16695 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.02■□□□□ 0.64
HIST3H3Q16695 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HIST3H3Q16695 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST3H3Q16695 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HIST3H3Q16695 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
HIST3H3Q16695 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.02■□□□□ 0.63
HIST3H3Q16695 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HIST3H3Q16695 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HIST3H3Q16695 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 AP004607.7-201ENST00000527152 1677 ntBASIC19.01■□□□□ 0.63
HIST3H3Q16695 TSPY26P-201ENST00000476365 1326 ntBASIC19.01■□□□□ 0.63
HIST3H3Q16695 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HIST3H3Q16695 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.01■□□□□ 0.63
HIST3H3Q16695 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.01■□□□□ 0.63
HIST3H3Q16695 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.01■□□□□ 0.63
HIST3H3Q16695 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H3Q16695 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.01■□□□□ 0.63
HIST3H3Q16695 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19■□□□□ 0.63
HIST3H3Q16695 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HIST3H3Q16695 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST3H3Q16695 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST3H3Q16695 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HIST3H3Q16695 FBXW4P1-201ENST00000426721 2239 ntBASIC19■□□□□ 0.63
HIST3H3Q16695 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HIST3H3Q16695 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms