Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 RTK1YDL025C 1863 nt3.39□□□□□ -1.87
CLP1Q08685 TDA3YHR009C 1572 nt3.39□□□□□ -1.87
CLP1Q08685 YDR442WYDR442W 393 nt3.39□□□□□ -1.87
CLP1Q08685 YEL028WYEL028W 462 nt3.39□□□□□ -1.87
CLP1Q08685 DSD1YGL196W 1287 nt3.39□□□□□ -1.87
CLP1Q08685 RIM11YMR139W 1113 nt3.39□□□□□ -1.87
CLP1Q08685 OCA2YNL056W 594 nt3.39□□□□□ -1.87
CLP1Q08685 RHO5YNL180C 996 nt3.39□□□□□ -1.87
CLP1Q08685 NDJ1YOL104C 1059 nt3.39□□□□□ -1.87
CLP1Q08685 SSM4YIL030C 3960 nt3.39□□□□□ -1.87
CLP1Q08685 DAN4YJR151C 3486 nt3.39□□□□□ -1.87
CLP1Q08685 SHQ1YIL104C 1524 nt3.39□□□□□ -1.87
CLP1Q08685 FAS1YKL182W 6156 nt3.38□□□□□ -1.87
CLP1Q08685 SDP1YIL113W 630 nt3.38□□□□□ -1.87
CLP1Q08685 DLS1YJL065C 504 nt3.38□□□□□ -1.87
CLP1Q08685 YKR047WYKR047W 306 nt3.38□□□□□ -1.87
CLP1Q08685 UNG1YML021C 1080 nt3.38□□□□□ -1.87
CLP1Q08685 RFC3YNL290W 1023 nt3.38□□□□□ -1.87
CLP1Q08685 MED7YOL135C 669 nt3.38□□□□□ -1.87
CLP1Q08685 ARO9YHR137W 1542 nt3.38□□□□□ -1.87
CLP1Q08685 CLB3YDL155W 1284 nt3.37□□□□□ -1.87
CLP1Q08685 RPS8BYER102W 603 nt3.37□□□□□ -1.87
CLP1Q08685 USE1YGL098W 738 nt3.37□□□□□ -1.87
CLP1Q08685 RPS8AYBL072C 603 nt3.37□□□□□ -1.87
CLP1Q08685 RUF5-1RUF5-1 710 nt3.37□□□□□ -1.87
CLP1Q08685 RUF5-2RUF5-2 710 nt3.37□□□□□ -1.87
CLP1Q08685 RCY1YJL204C 2523 nt3.37□□□□□ -1.87
CLP1Q08685 CUS1YMR240C 1311 nt3.37□□□□□ -1.87
CLP1Q08685 DSF2YBR007C 2211 nt3.36□□□□□ -1.87
CLP1Q08685 NDC80YIL144W 2076 nt3.36□□□□□ -1.87
CLP1Q08685 BCD1YHR040W 1101 nt3.36□□□□□ -1.87
CLP1Q08685 YIR014WYIR014W 729 nt3.36□□□□□ -1.87
CLP1Q08685 TAF4YMR005W 1167 nt3.36□□□□□ -1.87
CLP1Q08685 AIM41YOR215C 558 nt3.36□□□□□ -1.87
CLP1Q08685 RPS9BYBR189W 588 nt3.36□□□□□ -1.87
CLP1Q08685 RRM3YHR031C 2172 nt3.36□□□□□ -1.87
CLP1Q08685 YVC1YOR087W 2028 nt3.36□□□□□ -1.87
CLP1Q08685 YGR237CYGR237C 2358 nt3.36□□□□□ -1.87
CLP1Q08685 UBP8YMR223W 1416 nt3.36□□□□□ -1.87
CLP1Q08685 SEC15YGL233W 2733 nt3.35□□□□□ -1.87
CLP1Q08685 DBP10YDL031W 2988 nt3.35□□□□□ -1.87
CLP1Q08685 VMA8YEL051W 771 nt3.35□□□□□ -1.87
CLP1Q08685 SNL1YIL016W 480 nt3.35□□□□□ -1.87
CLP1Q08685 IRC25YLR021W 540 nt3.35□□□□□ -1.87
CLP1Q08685 NCE103YNL036W 666 nt3.35□□□□□ -1.87
CLP1Q08685 MRPL51YPR100W 423 nt3.35□□□□□ -1.87
CLP1Q08685 YPR108W-AYPR108W-A 213 nt3.35□□□□□ -1.87
CLP1Q08685 FES1YBR101C 873 nt3.35□□□□□ -1.87
CLP1Q08685 MDV1YJL112W 2145 nt3.34□□□□□ -1.87
CLP1Q08685 COX23YHR116W 456 nt3.34□□□□□ -1.87
CLP1Q08685 YHR180WYHR180W 492 nt3.34□□□□□ -1.87
CLP1Q08685 CHS3YBR023C 3498 nt3.34□□□□□ -1.87
CLP1Q08685 YOR296WYOR296W 3870 nt3.34□□□□□ -1.88
CLP1Q08685 PAM1YDR251W 2493 nt3.33□□□□□ -1.88
CLP1Q08685 YNR063WYNR063W 1824 nt3.33□□□□□ -1.88
CLP1Q08685 KAP104YBR017C 2757 nt3.33□□□□□ -1.88
CLP1Q08685 MIX14YDR031W 366 nt3.33□□□□□ -1.88
CLP1Q08685 PDS1YDR113C 1122 nt3.33□□□□□ -1.88
CLP1Q08685 RTN1YDR233C 888 nt3.33□□□□□ -1.88
CLP1Q08685 CDC26YFR036W 375 nt3.33□□□□□ -1.88
CLP1Q08685 tV(CAC)DtV(CAC)D 73 nt3.33□□□□□ -1.88
CLP1Q08685 tV(CAC)HtV(CAC)H 73 nt3.33□□□□□ -1.88
CLP1Q08685 YKL091CYKL091C 933 nt3.33□□□□□ -1.88
CLP1Q08685 MTR2YKL186C 555 nt3.33□□□□□ -1.88
CLP1Q08685 YLR416CYLR416C 399 nt3.33□□□□□ -1.88
CLP1Q08685 YPL168WYPL168W 1293 nt3.33□□□□□ -1.88
CLP1Q08685 YBR300CYBR300C 498 nt3.33□□□□□ -1.88
CLP1Q08685 YLR446WYLR446W 1302 nt3.33□□□□□ -1.88
CLP1Q08685 CTF18YMR078C 2226 nt3.33□□□□□ -1.88
CLP1Q08685 ARG5,6YER069W 2592 nt3.33□□□□□ -1.88
CLP1Q08685 AEP2YMR282C 1743 nt3.33□□□□□ -1.88
CLP1Q08685 DNM1YLL001W 2274 nt3.32□□□□□ -1.88
CLP1Q08685 MRPL49YJL096W 486 nt3.32□□□□□ -1.88
CLP1Q08685 ANB1YJR047C 474 nt3.32□□□□□ -1.88
CLP1Q08685 YBR089WYBR089W 600 nt3.32□□□□□ -1.88
CLP1Q08685 RSM23YGL129C 1353 nt3.32□□□□□ -1.88
CLP1Q08685 MPC54YOR177C 1395 nt3.32□□□□□ -1.88
CLP1Q08685 CCT7YJL111W 1653 nt3.32□□□□□ -1.88
CLP1Q08685 VBA4YDR119W 2307 nt3.32□□□□□ -1.88
CLP1Q08685 VAS1YGR094W 3315 nt3.31□□□□□ -1.88
CLP1Q08685 YAT2YER024W 2772 nt3.31□□□□□ -1.88
CLP1Q08685 UBP5YER144C 2418 nt3.31□□□□□ -1.88
CLP1Q08685 MDM38YOL027C 1722 nt3.31□□□□□ -1.88
CLP1Q08685 GYP6YJL044C 1377 nt3.31□□□□□ -1.88
CLP1Q08685 YLR402WYLR402W 192 nt3.31□□□□□ -1.88
CLP1Q08685 YET2YMR040W 483 nt3.31□□□□□ -1.88
CLP1Q08685 SHH3YMR118C 591 nt3.31□□□□□ -1.88
CLP1Q08685 CYC2YOR037W 1101 nt3.31□□□□□ -1.88
CLP1Q08685 STU1YBL034C 4542 nt3.31□□□□□ -1.88
CLP1Q08685 NFI1YOR156C 2181 nt3.31□□□□□ -1.88
CLP1Q08685 EXO5YBR163W 1758 nt3.3□□□□□ -1.88
CLP1Q08685 SAS4YDR181C 1446 nt3.3□□□□□ -1.88
CLP1Q08685 KTR6YPL053C 1341 nt3.3□□□□□ -1.88
CLP1Q08685 REG1YDR028C 3045 nt3.3□□□□□ -1.88
CLP1Q08685 PPA2YMR267W 933 nt3.3□□□□□ -1.88
CLP1Q08685 YNR068CYNR068C 819 nt3.3□□□□□ -1.88
CLP1Q08685 FAR1YJL157C 2493 nt3.3□□□□□ -1.88
CLP1Q08685 RAD7YJR052W 1698 nt3.3□□□□□ -1.88
CLP1Q08685 SIZ1YDR409W 2715 nt3.29□□□□□ -1.88
CLP1Q08685 RPA190YOR341W 4995 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 92.4 ms