Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YDR161WYDR161W 1164 nt3.1□□□□□ -1.91
RRP40Q08285 TRP4YDR354W 1143 nt3.1□□□□□ -1.91
RRP40Q08285 AGE2YIL044C 897 nt3.1□□□□□ -1.91
RRP40Q08285 GTT1YIR038C 705 nt3.1□□□□□ -1.91
RRP40Q08285 YLR225CYLR225C 1224 nt3.1□□□□□ -1.91
RRP40Q08285 SIL1YOL031C 1266 nt3.1□□□□□ -1.91
RRP40Q08285 NAT1YDL040C 2565 nt3.1□□□□□ -1.91
RRP40Q08285 YEL025CYEL025C 3567 nt3.1□□□□□ -1.91
RRP40Q08285 CEX1YOR112W 2286 nt3.1□□□□□ -1.91
RRP40Q08285 ENA2YDR039C 3276 nt3.1□□□□□ -1.91
RRP40Q08285 ENA1YDR040C 3276 nt3.1□□□□□ -1.91
RRP40Q08285 CLB5YPR120C 1308 nt3.1□□□□□ -1.91
RRP40Q08285 PKH1YDR490C 2301 nt3.1□□□□□ -1.91
RRP40Q08285 REC8YPR007C 2043 nt3.1□□□□□ -1.91
RRP40Q08285 AUS1YOR011W 4185 nt3.1□□□□□ -1.91
RRP40Q08285 NUP85YJR042W 2235 nt3.09□□□□□ -1.91
RRP40Q08285 SET1YHR119W 3243 nt3.09□□□□□ -1.91
RRP40Q08285 YCR007CYCR007C 720 nt3.09□□□□□ -1.91
RRP40Q08285 PEX21YGR239C 867 nt3.09□□□□□ -1.91
RRP40Q08285 MTR2YKL186C 555 nt3.09□□□□□ -1.91
RRP40Q08285 YOL050CYOL050C 321 nt3.09□□□□□ -1.91
RRP40Q08285 TAF14YPL129W 735 nt3.09□□□□□ -1.91
RRP40Q08285 ARG5,6YER069W 2592 nt3.09□□□□□ -1.91
RRP40Q08285 ISW2YOR304W 3363 nt3.09□□□□□ -1.92
RRP40Q08285 NRP1YDL167C 2160 nt3.08□□□□□ -1.92
RRP40Q08285 DOA4YDR069C 2781 nt3.08□□□□□ -1.92
RRP40Q08285 DLS1YJL065C 504 nt3.08□□□□□ -1.92
RRP40Q08285 YUH1YJR099W 711 nt3.08□□□□□ -1.92
RRP40Q08285 GIS2YNL255C 462 nt3.08□□□□□ -1.92
RRP40Q08285 NIP7YPL211W 546 nt3.08□□□□□ -1.92
RRP40Q08285 MIT1YEL007W 2001 nt3.08□□□□□ -1.92
RRP40Q08285 FLO5YHR211W 3228 nt3.07□□□□□ -1.92
RRP40Q08285 YBR238CYBR238C 2196 nt3.07□□□□□ -1.92
RRP40Q08285 snR57snR57 88 nt3.07□□□□□ -1.92
RRP40Q08285 OKP1YGR179C 1221 nt3.07□□□□□ -1.92
RRP40Q08285 SPO16YHR153C 597 nt3.07□□□□□ -1.92
RRP40Q08285 BET1YIL004C 429 nt3.07□□□□□ -1.92
RRP40Q08285 ARC15YIL062C 465 nt3.07□□□□□ -1.92
RRP40Q08285 SER3YER081W 1410 nt3.07□□□□□ -1.92
RRP40Q08285 SMI1YGR229C 1518 nt3.07□□□□□ -1.92
RRP40Q08285 RAD7YJR052W 1698 nt3.07□□□□□ -1.92
RRP40Q08285 ULP1YPL020C 1866 nt3.07□□□□□ -1.92
RRP40Q08285 YHP1YDR451C 1062 nt3.06□□□□□ -1.92
RRP40Q08285 PAU10YDR542W 363 nt3.06□□□□□ -1.92
RRP40Q08285 PUG1YER185W 912 nt3.06□□□□□ -1.92
RRP40Q08285 PAU11YGL261C 363 nt3.06□□□□□ -1.92
RRP40Q08285 YGR117CYGR117C 1431 nt3.06□□□□□ -1.92
RRP40Q08285 PAU13YHL046C 363 nt3.06□□□□□ -1.92
RRP40Q08285 DSN1YIR010W 1731 nt3.06□□□□□ -1.92
RRP40Q08285 PAU4YLR461W 363 nt3.06□□□□□ -1.92
RRP40Q08285 HMS1YOR032C 1305 nt3.06□□□□□ -1.92
RRP40Q08285 YOR314WYOR314W 330 nt3.06□□□□□ -1.92
RRP40Q08285 HMT1YBR034C 1047 nt3.06□□□□□ -1.92
RRP40Q08285 RPA43YOR340C 981 nt3.06□□□□□ -1.92
RRP40Q08285 RRP5YMR229C 5190 nt3.06□□□□□ -1.92
RRP40Q08285 UTP25YIL091C 2166 nt3.05□□□□□ -1.92
RRP40Q08285 YMR1YJR110W 2067 nt3.05□□□□□ -1.92
RRP40Q08285 YPK3YBR028C 1578 nt3.05□□□□□ -1.92
RRP40Q08285 YIL089WYIL089W 618 nt3.05□□□□□ -1.92
RRP40Q08285 RPS21AYKR057W 264 nt3.05□□□□□ -1.92
RRP40Q08285 YNL144W-AYNL144W-A 84 nt3.05□□□□□ -1.92
RRP40Q08285 SAS5YOR213C 747 nt3.05□□□□□ -1.92
RRP40Q08285 TMA16YOR252W 537 nt3.05□□□□□ -1.92
RRP40Q08285 MCM16YPR046W 546 nt3.05□□□□□ -1.92
RRP40Q08285 FRE4YNR060W 2160 nt3.05□□□□□ -1.92
RRP40Q08285 CTK1YKL139W 1587 nt3.04□□□□□ -1.92
RRP40Q08285 CHA4YLR098C 1947 nt3.04□□□□□ -1.92
RRP40Q08285 GRX6YDL010W 696 nt3.04□□□□□ -1.92
RRP40Q08285 DTD1YDL219W 453 nt3.04□□□□□ -1.92
RRP40Q08285 LST7YGR057C 729 nt3.04□□□□□ -1.92
RRP40Q08285 ILV5YLR355C 1188 nt3.04□□□□□ -1.92
RRP40Q08285 NDJ1YOL104C 1059 nt3.04□□□□□ -1.92
RRP40Q08285 VPS28YPL065W 729 nt3.04□□□□□ -1.92
RRP40Q08285 FES1YBR101C 873 nt3.04□□□□□ -1.92
RRP40Q08285 YBR242WYBR242W 717 nt3.04□□□□□ -1.92
RRP40Q08285 ROM1YGR070W 3468 nt3.04□□□□□ -1.92
RRP40Q08285 SNT1YCR033W 3681 nt3.04□□□□□ -1.92
RRP40Q08285 FUN12YAL035W 3009 nt3.03□□□□□ -1.92
RRP40Q08285 RAD5YLR032W 3510 nt3.03□□□□□ -1.92
RRP40Q08285 ENA5YDR038C 3276 nt3.03□□□□□ -1.92
RRP40Q08285 YHR080CYHR080C 4038 nt3.03□□□□□ -1.92
RRP40Q08285 NEM1YHR004C 1341 nt3.03□□□□□ -1.92
RRP40Q08285 YDL242WYDL242W 354 nt3.03□□□□□ -1.92
RRP40Q08285 YDR193WYDR193W 399 nt3.03□□□□□ -1.92
RRP40Q08285 TOS8YGL096W 831 nt3.03□□□□□ -1.92
RRP40Q08285 RPL19BYBL027W 570 nt3.03□□□□□ -1.92
RRP40Q08285 YNL013CYNL013C 378 nt3.03□□□□□ -1.92
RRP40Q08285 YBL065WYBL065W 345 nt3.03□□□□□ -1.92
RRP40Q08285 NOP4YPL043W 2058 nt3.03□□□□□ -1.92
RRP40Q08285 DNM1YLL001W 2274 nt3.03□□□□□ -1.92
RRP40Q08285 CIN8YEL061C 3003 nt3.03□□□□□ -1.92
RRP40Q08285 DAP2YHR028C 2457 nt3.02□□□□□ -1.93
RRP40Q08285 STE6YKL209C 3873 nt3.02□□□□□ -1.93
RRP40Q08285 YTA7YGR270W 4140 nt3.02□□□□□ -1.93
RRP40Q08285 YVC1YOR087W 2028 nt3.02□□□□□ -1.93
RRP40Q08285 GCN1YGL195W 8019 nt3.02□□□□□ -1.93
RRP40Q08285 KTR6YPL053C 1341 nt3.02□□□□□ -1.93
RRP40Q08285 YDL180WYDL180W 1644 nt3.02□□□□□ -1.93
RRP40Q08285 YFL040WYFL040W 1623 nt3.02□□□□□ -1.93
RRP40Q08285 MIC60YKR016W 1623 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms