Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PRKCDQ05655 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKCDQ05655 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
PRKCDQ05655 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.77■□□□□ 0.76
PRKCDQ05655 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.77■□□□□ 0.76
PRKCDQ05655 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 AC010542.4-201ENST00000563151 1910 ntBASIC19.77■□□□□ 0.76
PRKCDQ05655 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PRKCDQ05655 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.77■□□□□ 0.76
PRKCDQ05655 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PRKCDQ05655 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKCDQ05655 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRKCDQ05655 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.76■□□□□ 0.75
PRKCDQ05655 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.76■□□□□ 0.75
PRKCDQ05655 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.76■□□□□ 0.75
PRKCDQ05655 KRT16P3-201ENST00000439127 1283 ntBASIC19.76■□□□□ 0.75
PRKCDQ05655 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.76■□□□□ 0.75
PRKCDQ05655 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.76■□□□□ 0.75
PRKCDQ05655 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKCDQ05655 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PRKCDQ05655 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PRKCDQ05655 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRKCDQ05655 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRKCDQ05655 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.75■□□□□ 0.75
PRKCDQ05655 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PRKCDQ05655 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
PRKCDQ05655 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.75■□□□□ 0.75
PRKCDQ05655 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKCDQ05655 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.74■□□□□ 0.75
PRKCDQ05655 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PRKCDQ05655 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
PRKCDQ05655 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PRKCDQ05655 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.74■□□□□ 0.75
PRKCDQ05655 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKCDQ05655 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKCDQ05655 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 AC133637.1-201ENST00000624115 1537 ntBASIC19.73■□□□□ 0.75
PRKCDQ05655 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 AL031602.1-201ENST00000633169 911 ntBASIC19.73■□□□□ 0.75
PRKCDQ05655 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.73■□□□□ 0.75
PRKCDQ05655 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PRKCDQ05655 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCDQ05655 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PRKCDQ05655 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRKCDQ05655 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.72■□□□□ 0.75
PRKCDQ05655 pRNA.6-201ENST00000610482 90 ntBASIC19.72■□□□□ 0.75
PRKCDQ05655 pRNA.5-201ENST00000612139 90 ntBASIC19.72■□□□□ 0.75
PRKCDQ05655 pRNA.11-201ENST00000618423 90 ntBASIC19.72■□□□□ 0.75
PRKCDQ05655 pRNA.13-201ENST00000619112 90 ntBASIC19.72■□□□□ 0.75
PRKCDQ05655 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRKCDQ05655 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PRKCDQ05655 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.72■□□□□ 0.75
PRKCDQ05655 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCDQ05655 FAM99A-202ENST00000538190 1989 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms