Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.7■□□□□ 0.9
CFHR1Q03591 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CFHR1Q03591 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.7■□□□□ 0.9
CFHR1Q03591 KRT18P11-201ENST00000435214 1283 ntBASIC20.7■□□□□ 0.9
CFHR1Q03591 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.7■□□□□ 0.9
CFHR1Q03591 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.7■□□□□ 0.9
CFHR1Q03591 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.7■□□□□ 0.9
CFHR1Q03591 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFHR1Q03591 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFHR1Q03591 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
CFHR1Q03591 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.69■□□□□ 0.9
CFHR1Q03591 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.69■□□□□ 0.9
CFHR1Q03591 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFHR1Q03591 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFHR1Q03591 MFSD11-216ENST00000590393 1141 ntBASIC20.69■□□□□ 0.9
CFHR1Q03591 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFHR1Q03591 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFHR1Q03591 AC087742.1-201ENST00000575880 1738 ntBASIC20.69■□□□□ 0.9
CFHR1Q03591 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CFHR1Q03591 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.68■□□□□ 0.9
CFHR1Q03591 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.68■□□□□ 0.9
CFHR1Q03591 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.68■□□□□ 0.9
CFHR1Q03591 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CFHR1Q03591 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CFHR1Q03591 OR7E47P-201ENST00000546390 1422 ntBASIC20.68■□□□□ 0.9
CFHR1Q03591 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFHR1Q03591 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.67■□□□□ 0.9
CFHR1Q03591 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CFHR1Q03591 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.67■□□□□ 0.9
CFHR1Q03591 KRT18P6-201ENST00000555540 1265 ntBASIC20.67■□□□□ 0.9
CFHR1Q03591 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.67■□□□□ 0.9
CFHR1Q03591 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.67■□□□□ 0.9
CFHR1Q03591 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
CFHR1Q03591 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFHR1Q03591 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CFHR1Q03591 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CFHR1Q03591 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.66■□□□□ 0.9
CFHR1Q03591 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
CFHR1Q03591 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.66■□□□□ 0.9
CFHR1Q03591 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.66■□□□□ 0.9
CFHR1Q03591 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
CFHR1Q03591 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFHR1Q03591 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 AC137767.1-201ENST00000602918 1920 ntBASIC20.65■□□□□ 0.9
CFHR1Q03591 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.65■□□□□ 0.9
CFHR1Q03591 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CFHR1Q03591 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFHR1Q03591 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.65■□□□□ 0.9
CFHR1Q03591 MIR663A-201ENST00000385250 93 ntBASIC20.65■□□□□ 0.9
CFHR1Q03591 FAM201B-201ENST00000458407 597 ntBASIC20.65■□□□□ 0.9
CFHR1Q03591 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.65■□□□□ 0.9
CFHR1Q03591 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.65■□□□□ 0.9
CFHR1Q03591 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.65■□□□□ 0.9
CFHR1Q03591 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.65■□□□□ 0.9
CFHR1Q03591 AP001160.3-201ENST00000601484 763 ntBASIC20.65■□□□□ 0.9
CFHR1Q03591 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
CFHR1Q03591 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CFHR1Q03591 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CFHR1Q03591 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFHR1Q03591 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
CFHR1Q03591 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFHR1Q03591 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CFHR1Q03591 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CFHR1Q03591 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.64■□□□□ 0.89
CFHR1Q03591 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.64■□□□□ 0.89
CFHR1Q03591 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
CFHR1Q03591 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CFHR1Q03591 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFHR1Q03591 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFHR1Q03591 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms