Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YBX1P67809 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.05■□□□□ 0.96
YBX1P67809 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
YBX1P67809 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.04■□□□□ 0.96
YBX1P67809 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.04■□□□□ 0.96
YBX1P67809 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.04■□□□□ 0.96
YBX1P67809 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.04■□□□□ 0.96
YBX1P67809 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.04■□□□□ 0.96
YBX1P67809 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.04■□□□□ 0.96
YBX1P67809 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.04■□□□□ 0.96
YBX1P67809 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.04■□□□□ 0.96
YBX1P67809 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YBX1P67809 TSPY26P-201ENST00000476365 1326 ntBASIC21.04■□□□□ 0.96
YBX1P67809 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.03■□□□□ 0.96
YBX1P67809 AP005435.1-201ENST00000529293 1178 ntBASIC21.03■□□□□ 0.96
YBX1P67809 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.03■□□□□ 0.96
YBX1P67809 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
YBX1P67809 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YBX1P67809 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YBX1P67809 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YBX1P67809 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.02■□□□□ 0.96
YBX1P67809 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YBX1P67809 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
YBX1P67809 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.02■□□□□ 0.96
YBX1P67809 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
YBX1P67809 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
YBX1P67809 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 IGHV3-19-201ENST00000521488 291 ntBASIC21.01■□□□□ 0.95
YBX1P67809 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 AC026310.3-201ENST00000625186 2373 ntBASIC21.01■□□□□ 0.95
YBX1P67809 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
YBX1P67809 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
YBX1P67809 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21■□□□□ 0.95
YBX1P67809 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
YBX1P67809 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21■□□□□ 0.95
YBX1P67809 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21■□□□□ 0.95
YBX1P67809 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21■□□□□ 0.95
YBX1P67809 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21■□□□□ 0.95
YBX1P67809 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
YBX1P67809 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
YBX1P67809 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
YBX1P67809 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
YBX1P67809 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21■□□□□ 0.95
YBX1P67809 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
YBX1P67809 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
YBX1P67809 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.99■□□□□ 0.95
YBX1P67809 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.99■□□□□ 0.95
YBX1P67809 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.99■□□□□ 0.95
YBX1P67809 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.99■□□□□ 0.95
YBX1P67809 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.99■□□□□ 0.95
YBX1P67809 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
YBX1P67809 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YBX1P67809 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
YBX1P67809 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
YBX1P67809 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms