Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC099791.1-201ENST00000416440 715 ntBASIC20.38■□□□□ 0.85
TRA2BP62995 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.38■□□□□ 0.85
TRA2BP62995 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.38■□□□□ 0.85
TRA2BP62995 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.38■□□□□ 0.85
TRA2BP62995 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.38■□□□□ 0.85
TRA2BP62995 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRA2BP62995 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRA2BP62995 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRA2BP62995 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.37■□□□□ 0.85
TRA2BP62995 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRA2BP62995 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRA2BP62995 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.37■□□□□ 0.85
TRA2BP62995 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TRA2BP62995 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.37■□□□□ 0.85
TRA2BP62995 AP001330.3-201ENST00000520123 633 ntBASIC20.37■□□□□ 0.85
TRA2BP62995 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.37■□□□□ 0.85
TRA2BP62995 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRA2BP62995 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRA2BP62995 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRA2BP62995 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRA2BP62995 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRA2BP62995 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.36■□□□□ 0.85
TRA2BP62995 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 AC010542.4-201ENST00000563151 1910 ntBASIC20.36■□□□□ 0.85
TRA2BP62995 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.36■□□□□ 0.85
TRA2BP62995 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.36■□□□□ 0.85
TRA2BP62995 AL139246.5-201ENST00000606645 996 ntBASIC20.36■□□□□ 0.85
TRA2BP62995 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRA2BP62995 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.36■□□□□ 0.85
TRA2BP62995 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRA2BP62995 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 AP004607.7-201ENST00000527152 1677 ntBASIC20.35■□□□□ 0.85
TRA2BP62995 RASA4CP-201ENST00000424092 1398 ntBASIC20.35■□□□□ 0.85
TRA2BP62995 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
TRA2BP62995 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 SMUG1P1-201ENST00000590640 811 ntBASIC20.35■□□□□ 0.85
TRA2BP62995 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRA2BP62995 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRA2BP62995 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.34■□□□□ 0.85
TRA2BP62995 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRA2BP62995 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 FBXW4P1-201ENST00000426721 2239 ntBASIC20.34■□□□□ 0.85
TRA2BP62995 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
TRA2BP62995 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRA2BP62995 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TRA2BP62995 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRA2BP62995 MIR939-201ENST00000401314 82 ntBASIC20.34■□□□□ 0.85
TRA2BP62995 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.34■□□□□ 0.85
TRA2BP62995 AC091305.1-201ENST00000479476 895 ntBASIC20.34■□□□□ 0.85
TRA2BP62995 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.34■□□□□ 0.85
TRA2BP62995 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRA2BP62995 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.34■□□□□ 0.85
TRA2BP62995 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.34■□□□□ 0.85
TRA2BP62995 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.34■□□□□ 0.85
TRA2BP62995 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRA2BP62995 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.34■□□□□ 0.85
TRA2BP62995 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRA2BP62995 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.33■□□□□ 0.85
TRA2BP62995 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRA2BP62995 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRA2BP62995 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRA2BP62995 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRA2BP62995 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRA2BP62995 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRA2BP62995 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
TRA2BP62995 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.33■□□□□ 0.84
TRA2BP62995 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.33■□□□□ 0.84
TRA2BP62995 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.33■□□□□ 0.84
TRA2BP62995 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRA2BP62995 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 AF213884.3-201ENST00000563833 479 ntBASIC20.32■□□□□ 0.84
TRA2BP62995 AL031432.3-201ENST00000607698 485 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms