Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RPS3AP61247 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS3AP61247 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RPS3AP61247 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 EDA-201ENST00000338901 1233 ntBASIC20.05■□□□□ 0.8
RPS3AP61247 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.05■□□□□ 0.8
RPS3AP61247 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS3AP61247 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RPS3AP61247 ESRRAP2-201ENST00000418437 1549 ntBASIC20.05■□□□□ 0.8
RPS3AP61247 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.04■□□□□ 0.8
RPS3AP61247 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RPS3AP61247 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.04■□□□□ 0.8
RPS3AP61247 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.04■□□□□ 0.8
RPS3AP61247 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 MIR3181-201ENST00000578512 73 ntBASIC20.04■□□□□ 0.8
RPS3AP61247 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RPS3AP61247 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
RPS3AP61247 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS3AP61247 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 AC019069.1-201ENST00000610008 1333 ntBASIC20.03■□□□□ 0.8
RPS3AP61247 AF106564.1-201ENST00000607058 2553 ntBASIC20.03■□□□□ 0.8
RPS3AP61247 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RPS3AP61247 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RPS3AP61247 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RPS3AP61247 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPS3AP61247 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.03■□□□□ 0.8
RPS3AP61247 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.03■□□□□ 0.8
RPS3AP61247 AC005837.3-201ENST00000612163 286 ntBASIC20.03■□□□□ 0.8
RPS3AP61247 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPS3AP61247 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS3AP61247 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS3AP61247 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPS3AP61247 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RPS3AP61247 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RPS3AP61247 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS3AP61247 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS3AP61247 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS3AP61247 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RPS3AP61247 AL355001.2-201ENST00000620617 1191 ntBASIC20.02■□□□□ 0.8
RPS3AP61247 AC136469.2-201ENST00000623944 1028 ntBASIC20.02■□□□□ 0.8
RPS3AP61247 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS3AP61247 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.02■□□□□ 0.8
RPS3AP61247 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
RPS3AP61247 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPS3AP61247 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPS3AP61247 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
RPS3AP61247 C11orf96-202ENST00000528572 1834 ntBASIC20.02■□□□□ 0.79
RPS3AP61247 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RPS3AP61247 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS3AP61247 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.01■□□□□ 0.79
RPS3AP61247 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS3AP61247 FBXW4P1-201ENST00000426721 2239 ntBASIC20.01■□□□□ 0.79
RPS3AP61247 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS3AP61247 MIR4767-201ENST00000582827 78 ntBASIC20.01■□□□□ 0.79
RPS3AP61247 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.01■□□□□ 0.79
RPS3AP61247 AC007952.6-201ENST00000573168 2673 ntBASIC20.01■□□□□ 0.79
RPS3AP61247 AC003957.1-201ENST00000625108 2673 ntBASIC20.01■□□□□ 0.79
RPS3AP61247 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS3AP61247 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS3AP61247 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.01■□□□□ 0.79
RPS3AP61247 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RPS3AP61247 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPS3AP61247 AC079630.1-202ENST00000618127 1840 ntBASIC20■□□□□ 0.79
RPS3AP61247 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20■□□□□ 0.79
RPS3AP61247 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20■□□□□ 0.79
RPS3AP61247 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20■□□□□ 0.79
RPS3AP61247 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 AC142381.2-201ENST00000566120 298 ntBASIC20■□□□□ 0.79
RPS3AP61247 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
RPS3AP61247 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS3AP61247 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms