Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.29■■□□□ 1
CLNS1AP54105 SNX5-217ENST00000606557 1087 ntBASIC21.29■■□□□ 1
CLNS1AP54105 AC012354.3-201ENST00000623734 483 ntBASIC21.29■■□□□ 1
CLNS1AP54105 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLNS1AP54105 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CLNS1AP54105 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.29■■□□□ 1
CLNS1AP54105 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.29■■□□□ 1
CLNS1AP54105 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.29■■□□□ 1
CLNS1AP54105 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLNS1AP54105 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.28■■□□□ 1
CLNS1AP54105 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLNS1AP54105 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLNS1AP54105 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.28■■□□□ 1
CLNS1AP54105 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CLNS1AP54105 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.28■■□□□ 1
CLNS1AP54105 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLNS1AP54105 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CLNS1AP54105 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CLNS1AP54105 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.27■■□□□ 1
CLNS1AP54105 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLNS1AP54105 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.27■■□□□ 1
CLNS1AP54105 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.27■■□□□ 1
CLNS1AP54105 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.27■■□□□ 1
CLNS1AP54105 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.27■■□□□ 1
CLNS1AP54105 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLNS1AP54105 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLNS1AP54105 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLNS1AP54105 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLNS1AP54105 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLNS1AP54105 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLNS1AP54105 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLNS1AP54105 YBX1P4-201ENST00000392794 808 ntBASIC21.26■□□□□ 0.99
CLNS1AP54105 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.26■□□□□ 0.99
CLNS1AP54105 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.26■□□□□ 0.99
CLNS1AP54105 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.26■□□□□ 0.99
CLNS1AP54105 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.26■□□□□ 0.99
CLNS1AP54105 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLNS1AP54105 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.26■□□□□ 0.99
CLNS1AP54105 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLNS1AP54105 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CLNS1AP54105 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.26■□□□□ 0.99
CLNS1AP54105 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLNS1AP54105 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLNS1AP54105 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLNS1AP54105 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLNS1AP54105 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.25■□□□□ 0.99
CLNS1AP54105 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.25■□□□□ 0.99
CLNS1AP54105 AC144652.1-201ENST00000609974 1624 ntBASIC21.25■□□□□ 0.99
CLNS1AP54105 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLNS1AP54105 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLNS1AP54105 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLNS1AP54105 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLNS1AP54105 AC103834.1-201ENST00000520383 144 ntBASIC21.24■□□□□ 0.99
CLNS1AP54105 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLNS1AP54105 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLNS1AP54105 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.24■□□□□ 0.99
CLNS1AP54105 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms