Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YNL320WYNL320W 855 nt3.87□□□□□ -1.79
RPT4P53549 YOR186WYOR186W 435 nt3.87□□□□□ -1.79
RPT4P53549 STE6YKL209C 3873 nt3.87□□□□□ -1.79
RPT4P53549 GCN5YGR252W 1320 nt3.87□□□□□ -1.79
RPT4P53549 DHR2YKL078W 2208 nt3.87□□□□□ -1.79
RPT4P53549 MNR2YKL064W 2910 nt3.87□□□□□ -1.79
RPT4P53549 VPS45YGL095C 1734 nt3.87□□□□□ -1.79
RPT4P53549 SLI1YGR212W 1407 nt3.87□□□□□ -1.79
RPT4P53549 NUP60YAR002W 1620 nt3.86□□□□□ -1.79
RPT4P53549 PCL2YDL127W 927 nt3.86□□□□□ -1.79
RPT4P53549 CDC26YFR036W 375 nt3.86□□□□□ -1.79
RPT4P53549 MRPS17YMR188C 714 nt3.86□□□□□ -1.79
RPT4P53549 GOT1YMR292W 417 nt3.86□□□□□ -1.79
RPT4P53549 RFM1YOR279C 933 nt3.86□□□□□ -1.79
RPT4P53549 HAP4YKL109W 1665 nt3.86□□□□□ -1.79
RPT4P53549 GEM1YAL048C 1989 nt3.85□□□□□ -1.79
RPT4P53549 YVC1YOR087W 2028 nt3.85□□□□□ -1.79
RPT4P53549 IPI3YNL182C 1668 nt3.85□□□□□ -1.79
RPT4P53549 AIM6YDL237W 1173 nt3.85□□□□□ -1.79
RPT4P53549 NSA2YER126C 786 nt3.85□□□□□ -1.79
RPT4P53549 MAK16YAL025C 921 nt3.85□□□□□ -1.79
RPT4P53549 RNH203YLR154C 333 nt3.85□□□□□ -1.79
RPT4P53549 RUF20RUF20 443 nt3.85□□□□□ -1.79
RPT4P53549 TPM1YNL079C 600 nt3.85□□□□□ -1.79
RPT4P53549 YCL001W-AYCL001W-A 462 nt3.85□□□□□ -1.79
RPT4P53549 PIM1YBL022C 3402 nt3.85□□□□□ -1.79
RPT4P53549 TAF1YGR274C 3201 nt3.85□□□□□ -1.79
RPT4P53549 AVT7YIL088C 1473 nt3.85□□□□□ -1.79
RPT4P53549 RIT1YMR283C 1542 nt3.85□□□□□ -1.79
RPT4P53549 NOP4YPL043W 2058 nt3.84□□□□□ -1.79
RPT4P53549 YDL186WYDL186W 834 nt3.84□□□□□ -1.79
RPT4P53549 RPC11YDR045C 333 nt3.84□□□□□ -1.79
RPT4P53549 PAN5YHR063C 1140 nt3.84□□□□□ -1.79
RPT4P53549 REE1YJL217W 597 nt3.84□□□□□ -1.79
RPT4P53549 YLR156WYLR156W 345 nt3.84□□□□□ -1.79
RPT4P53549 YLR159WYLR159W 345 nt3.84□□□□□ -1.79
RPT4P53549 YLR161WYLR161W 345 nt3.84□□□□□ -1.79
RPT4P53549 CTL1YMR180C 963 nt3.84□□□□□ -1.79
RPT4P53549 ERG2YMR202W 669 nt3.84□□□□□ -1.79
RPT4P53549 RRI1YDL216C 1323 nt3.84□□□□□ -1.79
RPT4P53549 KTR6YPL053C 1341 nt3.84□□□□□ -1.79
RPT4P53549 YTA7YGR270W 4140 nt3.84□□□□□ -1.79
RPT4P53549 STE23YLR389C 3084 nt3.84□□□□□ -1.8
RPT4P53549 MRH1YDR033W 963 nt3.83□□□□□ -1.8
RPT4P53549 YGR107WYGR107W 450 nt3.83□□□□□ -1.8
RPT4P53549 CAB2YIL083C 1098 nt3.83□□□□□ -1.8
RPT4P53549 MTR2YKL186C 555 nt3.83□□□□□ -1.8
RPT4P53549 YLR042CYLR042C 486 nt3.83□□□□□ -1.8
RPT4P53549 SIC1YLR079W 855 nt3.83□□□□□ -1.8
RPT4P53549 YLR444CYLR444C 303 nt3.83□□□□□ -1.8
RPT4P53549 RUF21RUF21 707 nt3.83□□□□□ -1.8
RPT4P53549 OCA2YNL056W 594 nt3.83□□□□□ -1.8
RPT4P53549 RPS11BYBR048W 471 nt3.83□□□□□ -1.8
RPT4P53549 YPR142CYPR142C 564 nt3.83□□□□□ -1.8
RPT4P53549 ULS1YOR191W 4860 nt3.82□□□□□ -1.8
RPT4P53549 PRP3YDR473C 1410 nt3.82□□□□□ -1.8
RPT4P53549 RPS13YDR064W 456 nt3.82□□□□□ -1.8
RPT4P53549 OKP1YGR179C 1221 nt3.82□□□□□ -1.8
RPT4P53549 SEC65YML105C 822 nt3.82□□□□□ -1.8
RPT4P53549 IDH2YOR136W 1110 nt3.82□□□□□ -1.8
RPT4P53549 OXR1YPL196W 822 nt3.82□□□□□ -1.8
RPT4P53549 DSL1YNL258C 2265 nt3.82□□□□□ -1.8
RPT4P53549 KRE5YOR336W 4098 nt3.81□□□□□ -1.8
RPT4P53549 UBP12YJL197W 3765 nt3.81□□□□□ -1.8
RPT4P53549 POL1YNL102W 4407 nt3.81□□□□□ -1.8
RPT4P53549 MRPL11YDL202W 750 nt3.81□□□□□ -1.8
RPT4P53549 YGL218WYGL218W 651 nt3.81□□□□□ -1.8
RPT4P53549 YHL026CYHL026C 948 nt3.81□□□□□ -1.8
RPT4P53549 SRP40YKR092C 1221 nt3.81□□□□□ -1.8
RPT4P53549 YLR311CYLR311C 348 nt3.81□□□□□ -1.8
RPT4P53549 YBL096CYBL096C 309 nt3.81□□□□□ -1.8
RPT4P53549 HPA2YPR193C 471 nt3.81□□□□□ -1.8
RPT4P53549 GRS2YPR081C 1857 nt3.81□□□□□ -1.8
RPT4P53549 GCD1YOR260W 1737 nt3.81□□□□□ -1.8
RPT4P53549 PKH1YDR490C 2301 nt3.81□□□□□ -1.8
RPT4P53549 TAF8YML114C 1533 nt3.8□□□□□ -1.8
RPT4P53549 ISW2YOR304W 3363 nt3.8□□□□□ -1.8
RPT4P53549 RPS18AYDR450W 441 nt3.8□□□□□ -1.8
RPT4P53549 HAT2YEL056W 1206 nt3.8□□□□□ -1.8
RPT4P53549 RPS10BYMR230W 318 nt3.8□□□□□ -1.8
RPT4P53549 KIP3YGL216W 2418 nt3.8□□□□□ -1.8
RPT4P53549 RDI1YDL135C 609 nt3.79□□□□□ -1.8
RPT4P53549 RRG1YDR065W 1098 nt3.79□□□□□ -1.8
RPT4P53549 HSH49YOR319W 642 nt3.79□□□□□ -1.8
RPT4P53549 ASI1YMR119W 1875 nt3.79□□□□□ -1.8
RPT4P53549 YBR238CYBR238C 2196 nt3.79□□□□□ -1.8
RPT4P53549 ARO1YDR127W 4767 nt3.79□□□□□ -1.8
RPT4P53549 VID28YIL017C 2766 nt3.78□□□□□ -1.8
RPT4P53549 RNH202YDR279W 1053 nt3.78□□□□□ -1.8
RPT4P53549 BCD1YHR040W 1101 nt3.78□□□□□ -1.8
RPT4P53549 COX2Q0250 756 nt3.78□□□□□ -1.8
RPT4P53549 EAF7YNL136W 1278 nt3.78□□□□□ -1.8
RPT4P53549 RPL18AYOL120C 561 nt3.78□□□□□ -1.8
RPT4P53549 YOR114WYOR114W 885 nt3.78□□□□□ -1.8
RPT4P53549 SUT2YPR009W 807 nt3.78□□□□□ -1.8
RPT4P53549 REC8YPR007C 2043 nt3.78□□□□□ -1.8
RPT4P53549 DSN1YIR010W 1731 nt3.78□□□□□ -1.8
RPT4P53549 MCD4YKL165C 2760 nt3.78□□□□□ -1.8
RPT4P53549 UTP25YIL091C 2166 nt3.78□□□□□ -1.81
RPT4P53549 YHR202WYHR202W 1809 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms