Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR2JP52435 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR2JP52435 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
POLR2JP52435 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR2JP52435 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR2JP52435 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR2JP52435 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
POLR2JP52435 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR2JP52435 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
POLR2JP52435 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
POLR2JP52435 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR2JP52435 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR2JP52435 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
POLR2JP52435 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
POLR2JP52435 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
POLR2JP52435 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR2JP52435 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR2JP52435 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR2JP52435 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
POLR2JP52435 AF106564.1-201ENST00000607058 2553 ntBASIC20.56■□□□□ 0.88
POLR2JP52435 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR2JP52435 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR2JP52435 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR2JP52435 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
POLR2JP52435 AL451085.2-201ENST00000605085 799 ntBASIC20.56■□□□□ 0.88
POLR2JP52435 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR2JP52435 AC026471.6-201ENST00000622954 1905 ntBASIC20.56■□□□□ 0.88
POLR2JP52435 AC133637.1-201ENST00000624115 1537 ntBASIC20.56■□□□□ 0.88
POLR2JP52435 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR2JP52435 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR2JP52435 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR2JP52435 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
POLR2JP52435 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR2JP52435 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR2JP52435 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 MIR6724-1-201ENST00000616420 92 ntBASIC20.55■□□□□ 0.88
POLR2JP52435 MIR6724-2-201ENST00000616483 92 ntBASIC20.55■□□□□ 0.88
POLR2JP52435 MIR6724-4-201ENST00000617390 92 ntBASIC20.55■□□□□ 0.88
POLR2JP52435 MIR6724-3-201ENST00000622482 92 ntBASIC20.55■□□□□ 0.88
POLR2JP52435 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
POLR2JP52435 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR2JP52435 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR2JP52435 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR2JP52435 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR2JP52435 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLR2JP52435 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 OR7E47P-201ENST00000546390 1422 ntBASIC20.54■□□□□ 0.88
POLR2JP52435 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR2JP52435 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
POLR2JP52435 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
POLR2JP52435 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR2JP52435 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR2JP52435 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR2JP52435 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
POLR2JP52435 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR2JP52435 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR2JP52435 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR2JP52435 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR2JP52435 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
POLR2JP52435 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR2JP52435 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR2JP52435 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR2JP52435 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR2JP52435 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR2JP52435 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
POLR2JP52435 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR2JP52435 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR2JP52435 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR2JP52435 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR2JP52435 RARRES2P1-201ENST00000474487 481 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 AC009299.2-201ENST00000482477 511 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR2JP52435 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
POLR2JP52435 AC104564.3-201ENST00000582367 638 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 pRNA.6-201ENST00000610482 90 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 pRNA.5-201ENST00000612139 90 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 pRNA.11-201ENST00000618423 90 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 pRNA.13-201ENST00000619112 90 ntBASIC20.52■□□□□ 0.88
POLR2JP52435 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
POLR2JP52435 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms