Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.66■□□□□ 0.9
TRPC1P48995 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPC1P48995 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPC1P48995 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRPC1P48995 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TRPC1P48995 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPC1P48995 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPC1P48995 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPC1P48995 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPC1P48995 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPC1P48995 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TRPC1P48995 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.65■□□□□ 0.9
TRPC1P48995 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TRPC1P48995 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
TRPC1P48995 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPC1P48995 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRPC1P48995 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 SLC25A24-204ENST00000569674 2357 ntBASIC20.64■□□□□ 0.89
TRPC1P48995 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.64■□□□□ 0.89
TRPC1P48995 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 AC019069.1-201ENST00000610008 1333 ntBASIC20.64■□□□□ 0.89
TRPC1P48995 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
TRPC1P48995 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRPC1P48995 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TRPC1P48995 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRPC1P48995 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.63■□□□□ 0.89
TRPC1P48995 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRPC1P48995 SRD5A1P1-201ENST00000442297 786 ntBASIC20.63■□□□□ 0.89
TRPC1P48995 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.63■□□□□ 0.89
TRPC1P48995 AL139246.5-201ENST00000606645 996 ntBASIC20.63■□□□□ 0.89
TRPC1P48995 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TRPC1P48995 AC010542.4-201ENST00000563151 1910 ntBASIC20.63■□□□□ 0.89
TRPC1P48995 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.62■□□□□ 0.89
TRPC1P48995 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRPC1P48995 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 AL499627.2-201ENST00000606283 725 ntBASIC20.62■□□□□ 0.89
TRPC1P48995 AC110285.6-201ENST00000617652 491 ntBASIC20.62■□□□□ 0.89
TRPC1P48995 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.62■□□□□ 0.89
TRPC1P48995 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRPC1P48995 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRPC1P48995 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.62■□□□□ 0.89
TRPC1P48995 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRPC1P48995 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRPC1P48995 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.61■□□□□ 0.89
TRPC1P48995 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPC1P48995 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.61■□□□□ 0.89
TRPC1P48995 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPC1P48995 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRPC1P48995 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPC1P48995 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.61■□□□□ 0.89
TRPC1P48995 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRPC1P48995 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPC1P48995 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRPC1P48995 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.6■□□□□ 0.89
TRPC1P48995 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPC1P48995 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPC1P48995 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPC1P48995 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPC1P48995 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms