Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1DP48730 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1DP48730 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1DP48730 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.71■■□□□ 1.07
CSNK1DP48730 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
CSNK1DP48730 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CSNK1DP48730 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CSNK1DP48730 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.7■■□□□ 1.06
CSNK1DP48730 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.7■■□□□ 1.06
CSNK1DP48730 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1DP48730 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.7■■□□□ 1.06
CSNK1DP48730 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.7■■□□□ 1.06
CSNK1DP48730 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1DP48730 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1DP48730 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1DP48730 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.7■■□□□ 1.06
CSNK1DP48730 ECEL1P1-201ENST00000373592 1742 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1DP48730 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1DP48730 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L2-201ENST00000561772 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L6-201ENST00000626483 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L1-201ENST00000627662 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L8-201ENST00000629013 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L3-201ENST00000630187 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L7-201ENST00000630678 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4L5-201ENST00000630834 1275 ntBASIC21.69■■□□□ 1.06
CSNK1DP48730 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1DP48730 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1DP48730 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1DP48730 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CSNK1DP48730 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CSNK1DP48730 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.68■■□□□ 1.06
CSNK1DP48730 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CSNK1DP48730 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.68■■□□□ 1.06
CSNK1DP48730 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.68■■□□□ 1.06
CSNK1DP48730 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CSNK1DP48730 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1DP48730 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1DP48730 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.67■■□□□ 1.06
CSNK1DP48730 AP006587.3-201ENST00000525742 1516 ntBASIC21.67■■□□□ 1.06
CSNK1DP48730 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1DP48730 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1DP48730 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.67■■□□□ 1.06
CSNK1DP48730 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.67■■□□□ 1.06
CSNK1DP48730 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1DP48730 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
CSNK1DP48730 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1DP48730 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1DP48730 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CSNK1DP48730 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1DP48730 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.66■■□□□ 1.06
CSNK1DP48730 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CSNK1DP48730 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1DP48730 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1DP48730 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CSNK1DP48730 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.65■■□□□ 1.06
CSNK1DP48730 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1DP48730 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1DP48730 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.65■■□□□ 1.06
CSNK1DP48730 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1DP48730 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1DP48730 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1DP48730 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1DP48730 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.64■■□□□ 1.06
CSNK1DP48730 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
CSNK1DP48730 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.64■■□□□ 1.05
CSNK1DP48730 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1DP48730 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1DP48730 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1DP48730 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms