Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 MIP6YHR015W 1980 nt3.96□□□□□ -1.77
UPF3P48412 SPT23YKL020C 3249 nt3.96□□□□□ -1.78
UPF3P48412 LRS4YDR439W 1044 nt3.96□□□□□ -1.78
UPF3P48412 TLG1YDR468C 675 nt3.96□□□□□ -1.78
UPF3P48412 TAM41YGR046W 1158 nt3.96□□□□□ -1.78
UPF3P48412 GSP1YLR293C 660 nt3.96□□□□□ -1.78
UPF3P48412 GLO1YML004C 981 nt3.96□□□□□ -1.78
UPF3P48412 CDC5YMR001C 2118 nt3.96□□□□□ -1.78
UPF3P48412 ECM22YLR228C 2445 nt3.96□□□□□ -1.78
UPF3P48412 SIN4YNL236W 2925 nt3.96□□□□□ -1.78
UPF3P48412 NEM1YHR004C 1341 nt3.95□□□□□ -1.78
UPF3P48412 MAK11YKL021C 1407 nt3.95□□□□□ -1.78
UPF3P48412 ERB1YMR049C 2424 nt3.95□□□□□ -1.78
UPF3P48412 KIN2YLR096W 3444 nt3.95□□□□□ -1.78
UPF3P48412 SEC27YGL137W 2670 nt3.95□□□□□ -1.78
UPF3P48412 BI3Q0115 1554 nt3.95□□□□□ -1.78
UPF3P48412 ELO2YCR034W 1044 nt3.95□□□□□ -1.78
UPF3P48412 RPS13YDR064W 456 nt3.95□□□□□ -1.78
UPF3P48412 SPC19YDR201W 498 nt3.95□□□□□ -1.78
UPF3P48412 MEI4YER044C-A 1227 nt3.95□□□□□ -1.78
UPF3P48412 LSB1YGR136W 726 nt3.95□□□□□ -1.78
UPF3P48412 TDA10YGR205W 873 nt3.95□□□□□ -1.78
UPF3P48412 EPT1YHR123W 1176 nt3.95□□□□□ -1.78
UPF3P48412 YIR021W-AYIR021W-A 213 nt3.95□□□□□ -1.78
UPF3P48412 VPS25YJR102C 609 nt3.95□□□□□ -1.78
UPF3P48412 SRP40YKR092C 1221 nt3.95□□□□□ -1.78
UPF3P48412 YLR290CYLR290C 834 nt3.95□□□□□ -1.78
UPF3P48412 SSU72YNL222W 621 nt3.95□□□□□ -1.78
UPF3P48412 YOR082CYOR082C 342 nt3.95□□□□□ -1.78
UPF3P48412 YOR131CYOR131C 657 nt3.95□□□□□ -1.78
UPF3P48412 TRM11YOL124C 1302 nt3.95□□□□□ -1.78
UPF3P48412 SUP45YBR143C 1314 nt3.95□□□□□ -1.78
UPF3P48412 AIM7YDR063W 450 nt3.94□□□□□ -1.78
UPF3P48412 PTI1YGR156W 1278 nt3.94□□□□□ -1.78
UPF3P48412 RTA1YGR213C 954 nt3.94□□□□□ -1.78
UPF3P48412 YIL024CYIL024C 570 nt3.94□□□□□ -1.78
UPF3P48412 YLR156WYLR156W 345 nt3.94□□□□□ -1.78
UPF3P48412 YLR157W-DYLR157W-D 213 nt3.94□□□□□ -1.78
UPF3P48412 YLR159WYLR159W 345 nt3.94□□□□□ -1.78
UPF3P48412 YLR161WYLR161W 345 nt3.94□□□□□ -1.78
UPF3P48412 SAM37YMR060C 984 nt3.94□□□□□ -1.78
UPF3P48412 YOL162WYOL162W 648 nt3.94□□□□□ -1.78
UPF3P48412 RIB5YBR256C 717 nt3.94□□□□□ -1.78
UPF3P48412 FRE4YNR060W 2160 nt3.94□□□□□ -1.78
UPF3P48412 GRS2YPR081C 1857 nt3.94□□□□□ -1.78
UPF3P48412 RNR1YER070W 2667 nt3.93□□□□□ -1.78
UPF3P48412 YDR246W-AYDR246W-A 201 nt3.93□□□□□ -1.78
UPF3P48412 PMI40YER003C 1290 nt3.93□□□□□ -1.78
UPF3P48412 POG1YIL122W 1056 nt3.93□□□□□ -1.78
UPF3P48412 RDN58-1RDN58-1 158 nt3.93□□□□□ -1.78
UPF3P48412 RDN58-2RDN58-2 158 nt3.93□□□□□ -1.78
UPF3P48412 ERV41YML067C 1059 nt3.93□□□□□ -1.78
UPF3P48412 UFE1YOR075W 1041 nt3.93□□□□□ -1.78
UPF3P48412 CDC14YFR028C 1656 nt3.93□□□□□ -1.78
UPF3P48412 SRP72YPL210C 1923 nt3.93□□□□□ -1.78
UPF3P48412 RDS2YPL133C 1341 nt3.93□□□□□ -1.78
UPF3P48412 HUL5YGL141W 2733 nt3.93□□□□□ -1.78
UPF3P48412 RPO21YDL140C 5202 nt3.92□□□□□ -1.78
UPF3P48412 SPC105YGL093W 2754 nt3.92□□□□□ -1.78
UPF3P48412 KRE29YER038C 1395 nt3.92□□□□□ -1.78
UPF3P48412 RSC58YLR033W 1509 nt3.92□□□□□ -1.78
UPF3P48412 TFB2YPL122C 1542 nt3.92□□□□□ -1.78
UPF3P48412 FLO10YKR102W 3510 nt3.92□□□□□ -1.78
UPF3P48412 GSC2YGR032W 5688 nt3.92□□□□□ -1.78
UPF3P48412 UBC9YDL064W 474 nt3.92□□□□□ -1.78
UPF3P48412 CPR1YDR155C 489 nt3.92□□□□□ -1.78
UPF3P48412 HSP42YDR171W 1128 nt3.92□□□□□ -1.78
UPF3P48412 RRP17YDR412W 708 nt3.92□□□□□ -1.78
UPF3P48412 YFL051CYFL051C 483 nt3.92□□□□□ -1.78
UPF3P48412 CGR1YGL029W 363 nt3.92□□□□□ -1.78
UPF3P48412 TAN1YGL232W 870 nt3.92□□□□□ -1.78
UPF3P48412 PSF2YJL072C 642 nt3.92□□□□□ -1.78
UPF3P48412 YAL034C-BYAL034C-B 354 nt3.92□□□□□ -1.78
UPF3P48412 MET14YKL001C 609 nt3.92□□□□□ -1.78
UPF3P48412 GPN3YLR243W 819 nt3.92□□□□□ -1.78
UPF3P48412 HUB1YNR032C-A 222 nt3.92□□□□□ -1.78
UPF3P48412 MCT1YOR221C 1083 nt3.92□□□□□ -1.78
UPF3P48412 FSH3YOR280C 801 nt3.92□□□□□ -1.78
UPF3P48412 RPS10AYOR293W 318 nt3.92□□□□□ -1.78
UPF3P48412 DSS4YPR017C 432 nt3.92□□□□□ -1.78
UPF3P48412 YML096WYML096W 1578 nt3.92□□□□□ -1.78
UPF3P48412 NOC2YOR206W 2133 nt3.92□□□□□ -1.78
UPF3P48412 ALG8YOR067C 1734 nt3.92□□□□□ -1.78
UPF3P48412 YNR066CYNR066C 1311 nt3.92□□□□□ -1.78
UPF3P48412 MON1YGL124C 1935 nt3.91□□□□□ -1.78
UPF3P48412 YDR131CYDR131C 1671 nt3.91□□□□□ -1.78
UPF3P48412 BUD16YEL029C 939 nt3.91□□□□□ -1.78
UPF3P48412 DSE1YER124C 1722 nt3.91□□□□□ -1.78
UPF3P48412 ERJ5YFR041C 888 nt3.91□□□□□ -1.78
UPF3P48412 KXD1YGL079W 657 nt3.91□□□□□ -1.78
UPF3P48412 TAF6YGL112C 1551 nt3.91□□□□□ -1.78
UPF3P48412 DOG1YHR044C 741 nt3.91□□□□□ -1.78
UPF3P48412 NEJ1YLR265C 1029 nt3.91□□□□□ -1.78
UPF3P48412 MRPL3YMR024W 1173 nt3.91□□□□□ -1.78
UPF3P48412 LDS2YOL047C 1071 nt3.91□□□□□ -1.78
UPF3P48412 YPR059CYPR059C 387 nt3.91□□□□□ -1.78
UPF3P48412 PSY4YBL046W 1326 nt3.91□□□□□ -1.78
UPF3P48412 WHI3YNL197C 1986 nt3.91□□□□□ -1.78
UPF3P48412 AEP2YMR282C 1743 nt3.9□□□□□ -1.78
UPF3P48412 FOX2YKR009C 2703 nt3.9□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms