Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
KDM5CP41229 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
KDM5CP41229 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
KDM5CP41229 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
KDM5CP41229 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.66■■■□□ 2.82
KDM5CP41229 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
KDM5CP41229 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
KDM5CP41229 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
KDM5CP41229 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.64■■■□□ 2.82
KDM5CP41229 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC32.64■■■□□ 2.82
KDM5CP41229 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
KDM5CP41229 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 AC093787.1-201ENST00000450396 207 ntBASIC32.64■■■□□ 2.82
KDM5CP41229 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
KDM5CP41229 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC32.64■■■□□ 2.82
KDM5CP41229 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
KDM5CP41229 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.63■■■□□ 2.81
KDM5CP41229 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.63■■■□□ 2.81
KDM5CP41229 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC32.63■■■□□ 2.81
KDM5CP41229 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.63■■■□□ 2.81
KDM5CP41229 AL139125.2-201ENST00000623134 1869 ntBASIC32.63■■■□□ 2.81
KDM5CP41229 OR10C1-204ENST00000622521 1039 ntBASIC32.62■■■□□ 2.81
KDM5CP41229 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.62■■■□□ 2.81
KDM5CP41229 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
KDM5CP41229 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.62■■■□□ 2.81
KDM5CP41229 EEF1DP3-203ENST00000566025 782 ntBASIC32.62■■■□□ 2.81
KDM5CP41229 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC32.62■■■□□ 2.81
KDM5CP41229 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC32.62■■■□□ 2.81
KDM5CP41229 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
KDM5CP41229 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC32.61■■■□□ 2.81
KDM5CP41229 DUSP5P2-201ENST00000426873 1033 ntBASIC32.61■■■□□ 2.81
KDM5CP41229 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC32.61■■■□□ 2.81
KDM5CP41229 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.61■■■□□ 2.81
KDM5CP41229 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
KDM5CP41229 PREB-202ENST00000406567 1910 ntTSL 5 BASIC32.61■■■□□ 2.81
KDM5CP41229 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC32.6■■■□□ 2.81
KDM5CP41229 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
KDM5CP41229 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
KDM5CP41229 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
KDM5CP41229 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.6■■■□□ 2.81
KDM5CP41229 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC32.6■■■□□ 2.81
KDM5CP41229 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.6■■■□□ 2.81
KDM5CP41229 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
KDM5CP41229 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC32.59■■■□□ 2.81
KDM5CP41229 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
KDM5CP41229 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.59■■■□□ 2.81
KDM5CP41229 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.59■■■□□ 2.81
KDM5CP41229 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.59■■■□□ 2.81
KDM5CP41229 AC016405.3-201ENST00000607710 860 ntBASIC32.59■■■□□ 2.81
KDM5CP41229 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 TERF1P5-201ENST00000477545 1207 ntBASIC32.58■■■□□ 2.81
KDM5CP41229 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC32.58■■■□□ 2.81
KDM5CP41229 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.58■■■□□ 2.81
KDM5CP41229 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
KDM5CP41229 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
KDM5CP41229 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
KDM5CP41229 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
KDM5CP41229 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
KDM5CP41229 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.58■■■□□ 2.81
KDM5CP41229 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.57■■■□□ 2.81
KDM5CP41229 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC32.57■■■□□ 2.8
KDM5CP41229 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.57■■■□□ 2.8
KDM5CP41229 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
KDM5CP41229 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.57■■■□□ 2.8
KDM5CP41229 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
KDM5CP41229 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
KDM5CP41229 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
KDM5CP41229 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC32.56■■■□□ 2.8
KDM5CP41229 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.56■■■□□ 2.8
KDM5CP41229 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.55■■■□□ 2.8
KDM5CP41229 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
KDM5CP41229 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.55■■■□□ 2.8
KDM5CP41229 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.55■■■□□ 2.8
KDM5CP41229 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
KDM5CP41229 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
KDM5CP41229 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
KDM5CP41229 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
KDM5CP41229 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.54■■■□□ 2.8
KDM5CP41229 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
KDM5CP41229 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms