Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 Z98882.1-201ENST00000622160 2253 ntBASIC18.67■□□□□ 0.58
GDNFP39905 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.67■□□□□ 0.58
GDNFP39905 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
GDNFP39905 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GDNFP39905 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
GDNFP39905 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDNFP39905 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 TSPY9P-201ENST00000440215 945 ntBASIC18.66■□□□□ 0.58
GDNFP39905 TSPY11P-201ENST00000442607 1045 ntBASIC18.66■□□□□ 0.58
GDNFP39905 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.66■□□□□ 0.58
GDNFP39905 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDNFP39905 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
GDNFP39905 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GDNFP39905 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GDNFP39905 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GDNFP39905 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 AC144652.1-201ENST00000609974 1624 ntBASIC18.65■□□□□ 0.58
GDNFP39905 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.65■□□□□ 0.58
GDNFP39905 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.65■□□□□ 0.58
GDNFP39905 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.65■□□□□ 0.58
GDNFP39905 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.65■□□□□ 0.58
GDNFP39905 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.65■□□□□ 0.58
GDNFP39905 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDNFP39905 FEM1AP4-201ENST00000443167 1987 ntBASIC18.64■□□□□ 0.58
GDNFP39905 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GDNFP39905 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.64■□□□□ 0.57
GDNFP39905 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GDNFP39905 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.64■□□□□ 0.57
GDNFP39905 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GDNFP39905 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GDNFP39905 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 LINC01960-201ENST00000563759 1884 ntBASIC18.63■□□□□ 0.57
GDNFP39905 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.63■□□□□ 0.57
GDNFP39905 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GDNFP39905 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
GDNFP39905 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.63■□□□□ 0.57
GDNFP39905 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 MIR6722-201ENST00000617286 78 ntBASIC18.63■□□□□ 0.57
GDNFP39905 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GDNFP39905 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.63■□□□□ 0.57
GDNFP39905 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDNFP39905 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
GDNFP39905 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
GDNFP39905 UNC93B8-201ENST00000511903 705 ntBASIC18.62■□□□□ 0.57
GDNFP39905 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.62■□□□□ 0.57
GDNFP39905 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GDNFP39905 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDNFP39905 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GDNFP39905 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GDNFP39905 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GDNFP39905 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDNFP39905 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDNFP39905 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms