Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.75■■□□□ 1.23
MMP8P22894 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
MMP8P22894 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
MMP8P22894 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
MMP8P22894 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
MMP8P22894 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.75■■□□□ 1.23
MMP8P22894 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
MMP8P22894 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.75■■□□□ 1.23
MMP8P22894 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.74■■□□□ 1.23
MMP8P22894 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.74■■□□□ 1.23
MMP8P22894 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 MIR939-201ENST00000401314 82 ntBASIC22.74■■□□□ 1.23
MMP8P22894 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.74■■□□□ 1.23
MMP8P22894 AL139246.5-201ENST00000606645 996 ntBASIC22.74■■□□□ 1.23
MMP8P22894 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.74■■□□□ 1.23
MMP8P22894 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.74■■□□□ 1.23
MMP8P22894 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MMP8P22894 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.73■■□□□ 1.23
MMP8P22894 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.73■■□□□ 1.23
MMP8P22894 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.73■■□□□ 1.23
MMP8P22894 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.73■■□□□ 1.23
MMP8P22894 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
MMP8P22894 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
MMP8P22894 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.73■■□□□ 1.23
MMP8P22894 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.73■■□□□ 1.23
MMP8P22894 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
MMP8P22894 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 AF213884.3-201ENST00000563833 479 ntBASIC22.72■■□□□ 1.23
MMP8P22894 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MMP8P22894 AL136967.2-201ENST00000623968 743 ntBASIC22.72■■□□□ 1.23
MMP8P22894 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.72■■□□□ 1.23
MMP8P22894 AC026471.6-201ENST00000622954 1905 ntBASIC22.72■■□□□ 1.23
MMP8P22894 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.71■■□□□ 1.23
MMP8P22894 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.71■■□□□ 1.23
MMP8P22894 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
MMP8P22894 SMUG1P1-201ENST00000590640 811 ntBASIC22.71■■□□□ 1.23
MMP8P22894 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.71■■□□□ 1.23
MMP8P22894 RASA4CP-201ENST00000424092 1398 ntBASIC22.71■■□□□ 1.23
MMP8P22894 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
MMP8P22894 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
MMP8P22894 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
MMP8P22894 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.7■■□□□ 1.23
MMP8P22894 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.23
MMP8P22894 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.7■■□□□ 1.22
MMP8P22894 AC091305.1-201ENST00000479476 895 ntBASIC22.7■■□□□ 1.22
MMP8P22894 SUDS3P1-201ENST00000505831 966 ntBASIC22.7■■□□□ 1.22
MMP8P22894 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.7■■□□□ 1.22
MMP8P22894 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
MMP8P22894 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.7■■□□□ 1.22
MMP8P22894 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.7■■□□□ 1.22
MMP8P22894 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
MMP8P22894 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
MMP8P22894 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
MMP8P22894 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.69■■□□□ 1.22
MMP8P22894 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.69■■□□□ 1.22
MMP8P22894 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.69■■□□□ 1.22
MMP8P22894 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.69■■□□□ 1.22
MMP8P22894 AL034346.1-201ENST00000568244 1277 ntBASIC22.69■■□□□ 1.22
MMP8P22894 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.69■■□□□ 1.22
MMP8P22894 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
MMP8P22894 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.69■■□□□ 1.22
MMP8P22894 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.69■■□□□ 1.22
MMP8P22894 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
MMP8P22894 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 AP004607.7-201ENST00000527152 1677 ntBASIC22.68■■□□□ 1.22
MMP8P22894 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 TSPY26P-201ENST00000476365 1326 ntBASIC22.68■■□□□ 1.22
MMP8P22894 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
MMP8P22894 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
MMP8P22894 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms