Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF1P18846 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF1P18846 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF1P18846 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ATF1P18846 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF1P18846 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.88■□□□□ 0.61
ATF1P18846 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF1P18846 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF1P18846 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATF1P18846 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF1P18846 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.87■□□□□ 0.61
ATF1P18846 AC004687.1-201ENST00000579003 1625 ntBASIC18.87■□□□□ 0.61
ATF1P18846 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.87■□□□□ 0.61
ATF1P18846 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF1P18846 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF1P18846 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATF1P18846 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.86■□□□□ 0.61
ATF1P18846 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ATF1P18846 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.86■□□□□ 0.61
ATF1P18846 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ATF1P18846 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.86■□□□□ 0.61
ATF1P18846 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
ATF1P18846 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
ATF1P18846 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
ATF1P18846 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATF1P18846 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF1P18846 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.86■□□□□ 0.61
ATF1P18846 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.85■□□□□ 0.61
ATF1P18846 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATF1P18846 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 CA15P2-201ENST00000611168 834 ntBASIC18.85■□□□□ 0.61
ATF1P18846 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF1P18846 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF1P18846 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATF1P18846 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ATF1P18846 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF1P18846 AL121603.2-201ENST00000557373 2117 ntBASIC18.84■□□□□ 0.61
ATF1P18846 AL451085.2-201ENST00000605085 799 ntBASIC18.84■□□□□ 0.61
ATF1P18846 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF1P18846 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF1P18846 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF1P18846 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF1P18846 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF1P18846 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF1P18846 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF1P18846 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF1P18846 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATF1P18846 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ATF1P18846 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF1P18846 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF1P18846 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ATF1P18846 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATF1P18846 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
ATF1P18846 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATF1P18846 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF1P18846 MIR6724-1-201ENST00000616420 92 ntBASIC18.82■□□□□ 0.6
ATF1P18846 MIR6724-2-201ENST00000616483 92 ntBASIC18.82■□□□□ 0.6
ATF1P18846 MIR6724-4-201ENST00000617390 92 ntBASIC18.82■□□□□ 0.6
ATF1P18846 MIR6724-3-201ENST00000622482 92 ntBASIC18.82■□□□□ 0.6
ATF1P18846 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF1P18846 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 LINC01521-201ENST00000504184 1943 ntBASIC18.82■□□□□ 0.6
ATF1P18846 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATF1P18846 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF1P18846 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATF1P18846 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF1P18846 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF1P18846 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
ATF1P18846 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATF1P18846 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms