Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL4P13236 TSPY6P-201ENST00000448518 926 ntBASIC20.46■□□□□ 0.87
CCL4P13236 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.46■□□□□ 0.87
CCL4P13236 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.46■□□□□ 0.87
CCL4P13236 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.46■□□□□ 0.87
CCL4P13236 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL4P13236 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCL4P13236 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.45■□□□□ 0.86
CCL4P13236 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL4P13236 AC142086.2-201ENST00000569753 217 ntBASIC20.45■□□□□ 0.86
CCL4P13236 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
CCL4P13236 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL4P13236 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL4P13236 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL4P13236 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCL4P13236 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL4P13236 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCL4P13236 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL4P13236 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCL4P13236 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
CCL4P13236 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCL4P13236 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCL4P13236 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCL4P13236 OR7E47P-201ENST00000546390 1422 ntBASIC20.44■□□□□ 0.86
CCL4P13236 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.44■□□□□ 0.86
CCL4P13236 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCL4P13236 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCL4P13236 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.43■□□□□ 0.86
CCL4P13236 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.43■□□□□ 0.86
CCL4P13236 GUSBP6-202ENST00000438529 1198 ntBASIC20.43■□□□□ 0.86
CCL4P13236 AC010141.2-201ENST00000452426 721 ntBASIC20.43■□□□□ 0.86
CCL4P13236 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCL4P13236 LINC00526-201ENST00000581067 1875 ntBASIC20.43■□□□□ 0.86
CCL4P13236 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCL4P13236 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL4P13236 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL4P13236 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.42■□□□□ 0.86
CCL4P13236 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL4P13236 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL4P13236 AC138907.5-202ENST00000569484 235 ntBASIC20.42■□□□□ 0.86
CCL4P13236 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCL4P13236 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.42■□□□□ 0.86
CCL4P13236 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL4P13236 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL4P13236 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL4P13236 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.41■□□□□ 0.86
CCL4P13236 CNN2P6-201ENST00000439038 900 ntBASIC20.41■□□□□ 0.86
CCL4P13236 CD99P1-205ENST00000527459 561 ntBASIC20.41■□□□□ 0.86
CCL4P13236 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.41■□□□□ 0.86
CCL4P13236 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.41■□□□□ 0.86
CCL4P13236 AL138781.1-201ENST00000566567 1274 ntBASIC20.41■□□□□ 0.86
CCL4P13236 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.41■□□□□ 0.86
CCL4P13236 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.41■□□□□ 0.86
CCL4P13236 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.41■□□□□ 0.86
CCL4P13236 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCL4P13236 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL4P13236 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCL4P13236 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL4P13236 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL4P13236 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.4■□□□□ 0.86
CCL4P13236 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCL4P13236 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL4P13236 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL4P13236 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.4■□□□□ 0.86
CCL4P13236 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCL4P13236 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.4■□□□□ 0.86
CCL4P13236 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCL4P13236 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms