Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DEFA4P12838 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.42■□□□□ 0.38
DEFA4P12838 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
DEFA4P12838 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEFA4P12838 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.42■□□□□ 0.38
DEFA4P12838 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DEFA4P12838 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.41■□□□□ 0.38
DEFA4P12838 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
DEFA4P12838 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
DEFA4P12838 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.41■□□□□ 0.38
DEFA4P12838 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
DEFA4P12838 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEFA4P12838 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.4■□□□□ 0.38
DEFA4P12838 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DEFA4P12838 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
DEFA4P12838 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
DEFA4P12838 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.4■□□□□ 0.38
DEFA4P12838 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DEFA4P12838 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.4■□□□□ 0.38
DEFA4P12838 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.4■□□□□ 0.38
DEFA4P12838 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEFA4P12838 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.39■□□□□ 0.38
DEFA4P12838 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DEFA4P12838 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.39■□□□□ 0.38
DEFA4P12838 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
DEFA4P12838 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEFA4P12838 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEFA4P12838 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.39■□□□□ 0.37
DEFA4P12838 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DEFA4P12838 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEFA4P12838 AC241377.3-202ENST00000626088 1088 ntBASIC17.39■□□□□ 0.37
DEFA4P12838 AC241585.3-202ENST00000628937 1088 ntBASIC17.39■□□□□ 0.37
DEFA4P12838 AC245100.8-202ENST00000629247 1058 ntBASIC17.39■□□□□ 0.37
DEFA4P12838 AC004687.1-201ENST00000579003 1625 ntBASIC17.39■□□□□ 0.37
DEFA4P12838 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEFA4P12838 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
DEFA4P12838 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.38■□□□□ 0.37
DEFA4P12838 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.38■□□□□ 0.37
DEFA4P12838 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 AC087742.1-201ENST00000575880 1738 ntBASIC17.38■□□□□ 0.37
DEFA4P12838 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DEFA4P12838 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.37■□□□□ 0.37
DEFA4P12838 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
DEFA4P12838 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DEFA4P12838 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DEFA4P12838 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 FAM99A-202ENST00000538190 1989 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms