Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.37■■□□□ 1.17
CD48P09326 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
CD48P09326 PBX2P1-201ENST00000493219 1291 ntBASIC22.37■■□□□ 1.17
CD48P09326 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.37■■□□□ 1.17
CD48P09326 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CD48P09326 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CD48P09326 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CD48P09326 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CD48P09326 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CD48P09326 AC233992.3-201ENST00000607491 485 ntBASIC22.36■■□□□ 1.17
CD48P09326 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD48P09326 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.36■■□□□ 1.17
CD48P09326 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CD48P09326 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD48P09326 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD48P09326 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CD48P09326 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CD48P09326 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD48P09326 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.35■■□□□ 1.17
CD48P09326 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.35■■□□□ 1.17
CD48P09326 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.35■■□□□ 1.17
CD48P09326 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.35■■□□□ 1.17
CD48P09326 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
CD48P09326 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD48P09326 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CD48P09326 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.34■■□□□ 1.17
CD48P09326 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 AC106739.1-201ENST00000617035 715 ntBASIC22.34■■□□□ 1.17
CD48P09326 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.34■■□□□ 1.17
CD48P09326 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.34■■□□□ 1.17
CD48P09326 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.34■■□□□ 1.17
CD48P09326 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD48P09326 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.34■■□□□ 1.17
CD48P09326 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD48P09326 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD48P09326 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD48P09326 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.33■■□□□ 1.17
CD48P09326 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD48P09326 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD48P09326 AC133561.4-201ENST00000566112 224 ntBASIC22.33■■□□□ 1.17
CD48P09326 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.33■■□□□ 1.17
CD48P09326 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.33■■□□□ 1.17
CD48P09326 AC008764.7-201ENST00000593779 1081 ntBASIC22.33■■□□□ 1.17
CD48P09326 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CD48P09326 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CD48P09326 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
CD48P09326 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CD48P09326 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CD48P09326 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.32■■□□□ 1.16
CD48P09326 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.32■■□□□ 1.16
CD48P09326 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.32■■□□□ 1.16
CD48P09326 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.32■■□□□ 1.16
CD48P09326 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
CD48P09326 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CD48P09326 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 AL137060.1-201ENST00000618151 2648 ntBASIC22.31■■□□□ 1.16
CD48P09326 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
CD48P09326 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CD48P09326 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.31■■□□□ 1.16
CD48P09326 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CD48P09326 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
CD48P09326 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.31■■□□□ 1.16
CD48P09326 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.31■■□□□ 1.16
CD48P09326 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.31■■□□□ 1.16
CD48P09326 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.31■■□□□ 1.16
CD48P09326 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CD48P09326 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.3■■□□□ 1.16
CD48P09326 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.3■■□□□ 1.16
CD48P09326 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms