Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGN1P05114 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HMGN1P05114 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGN1P05114 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HMGN1P05114 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGN1P05114 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGN1P05114 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGN1P05114 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGN1P05114 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGN1P05114 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HMGN1P05114 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGN1P05114 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
HMGN1P05114 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGN1P05114 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 AC241377.3-202ENST00000626088 1088 ntBASIC19.45■□□□□ 0.7
HMGN1P05114 AC241585.3-202ENST00000628937 1088 ntBASIC19.45■□□□□ 0.7
HMGN1P05114 AC245100.8-202ENST00000629247 1058 ntBASIC19.45■□□□□ 0.7
HMGN1P05114 AL031602.1-201ENST00000633169 911 ntBASIC19.45■□□□□ 0.7
HMGN1P05114 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HMGN1P05114 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGN1P05114 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGN1P05114 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGN1P05114 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGN1P05114 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGN1P05114 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HMGN1P05114 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGN1P05114 AC104564.3-201ENST00000582367 638 ntBASIC19.44■□□□□ 0.7
HMGN1P05114 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGN1P05114 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGN1P05114 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGN1P05114 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGN1P05114 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGN1P05114 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGN1P05114 AL117332.1-201ENST00000622628 974 ntBASIC19.43■□□□□ 0.7
HMGN1P05114 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HMGN1P05114 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGN1P05114 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGN1P05114 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGN1P05114 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HMGN1P05114 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGN1P05114 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGN1P05114 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HMGN1P05114 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGN1P05114 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGN1P05114 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGN1P05114 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGN1P05114 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGN1P05114 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGN1P05114 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGN1P05114 OR7E47P-201ENST00000546390 1422 ntBASIC19.42■□□□□ 0.7
HMGN1P05114 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGN1P05114 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGN1P05114 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
HMGN1P05114 FEM1AP4-201ENST00000443167 1987 ntBASIC19.41■□□□□ 0.7
HMGN1P05114 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGN1P05114 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGN1P05114 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HMGN1P05114 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGN1P05114 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGN1P05114 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms