Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 LINC01529-204ENST00000636474 1715 ntBASIC19.28■□□□□ 0.68
HLA-DPB1P04440 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPB1P04440 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HLA-DPB1P04440 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPB1P04440 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPB1P04440 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DPB1P04440 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPB1P04440 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPB1P04440 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms