Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
IFNA1P01562 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.04■□□□□ 0.32
IFNA1P01562 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.04■□□□□ 0.32
IFNA1P01562 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.03■□□□□ 0.32
IFNA1P01562 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.03■□□□□ 0.32
IFNA1P01562 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
IFNA1P01562 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.03■□□□□ 0.32
IFNA1P01562 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.03■□□□□ 0.32
IFNA1P01562 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNA1P01562 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNA1P01562 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNA1P01562 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.02■□□□□ 0.32
IFNA1P01562 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.02■□□□□ 0.32
IFNA1P01562 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNA1P01562 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IFNA1P01562 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNA1P01562 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNA1P01562 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IFNA1P01562 AC026202.3-201ENST00000600805 1127 ntBASIC17.02■□□□□ 0.32
IFNA1P01562 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNA1P01562 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
IFNA1P01562 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNA1P01562 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.02■□□□□ 0.31
IFNA1P01562 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IFNA1P01562 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 RAP2CP1-202ENST00000605179 643 ntBASIC17.01■□□□□ 0.31
IFNA1P01562 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IFNA1P01562 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
IFNA1P01562 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
IFNA1P01562 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
IFNA1P01562 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IFNA1P01562 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNA1P01562 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17■□□□□ 0.31
IFNA1P01562 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17■□□□□ 0.31
IFNA1P01562 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17■□□□□ 0.31
IFNA1P01562 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IFNA1P01562 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
IFNA1P01562 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
IFNA1P01562 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.99■□□□□ 0.31
IFNA1P01562 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
IFNA1P01562 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IFNA1P01562 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
IFNA1P01562 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
IFNA1P01562 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.99■□□□□ 0.31
IFNA1P01562 AF106564.1-201ENST00000607058 2553 ntBASIC16.99■□□□□ 0.31
IFNA1P01562 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 LINC01006-201ENST00000333319 2292 ntBASIC16.99■□□□□ 0.31
IFNA1P01562 LINC01960-201ENST00000563759 1884 ntBASIC16.99■□□□□ 0.31
IFNA1P01562 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFNA1P01562 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
IFNA1P01562 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
IFNA1P01562 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.98■□□□□ 0.31
IFNA1P01562 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IFNA1P01562 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IFNA1P01562 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms