Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE6O95741 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 AC004911.1-201ENST00000416316 871 ntBASIC21.14■□□□□ 0.97
CPNE6O95741 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.14■□□□□ 0.97
CPNE6O95741 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CPNE6O95741 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE6O95741 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CPNE6O95741 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE6O95741 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE6O95741 AC007375.3-201ENST00000600936 2314 ntBASIC21.13■□□□□ 0.97
CPNE6O95741 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE6O95741 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE6O95741 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPNE6O95741 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE6O95741 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE6O95741 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPNE6O95741 AC010141.3-201ENST00000456659 717 ntBASIC21.12■□□□□ 0.97
CPNE6O95741 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE6O95741 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE6O95741 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.12■□□□□ 0.97
CPNE6O95741 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 TPRG1LP1-201ENST00000598702 760 ntBASIC21.12■□□□□ 0.97
CPNE6O95741 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 GUSBP5-202ENST00000510805 1989 ntBASIC21.12■□□□□ 0.97
CPNE6O95741 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE6O95741 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE6O95741 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE6O95741 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE6O95741 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE6O95741 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 BX005040.4-201ENST00000637145 1518 ntBASIC21.11■□□□□ 0.97
CPNE6O95741 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE6O95741 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE6O95741 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.11■□□□□ 0.97
CPNE6O95741 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 ECEL1P1-201ENST00000373592 1742 ntBASIC21.11■□□□□ 0.97
CPNE6O95741 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CPNE6O95741 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE6O95741 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE6O95741 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE6O95741 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE6O95741 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CPNE6O95741 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE6O95741 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE6O95741 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE6O95741 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE6O95741 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE6O95741 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE6O95741 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE6O95741 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPNE6O95741 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE6O95741 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE6O95741 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE6O95741 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE6O95741 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CPNE6O95741 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE6O95741 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE6O95741 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE6O95741 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE6O95741 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE6O95741 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE6O95741 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.08■□□□□ 0.97
CPNE6O95741 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms