Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC073648.6-201ENST00000641589 218 ntBASIC32.83■■■□□ 2.85
RAPGEF3O95398 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
RAPGEF3O95398 DUSP8P3-201ENST00000399571 1760 ntBASIC32.83■■■□□ 2.85
RAPGEF3O95398 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.82■■■□□ 2.84
RAPGEF3O95398 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RAPGEF3O95398 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
RAPGEF3O95398 ECEL1P3-201ENST00000427961 737 ntBASIC32.82■■■□□ 2.84
RAPGEF3O95398 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.82■■■□□ 2.84
RAPGEF3O95398 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
RAPGEF3O95398 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RAPGEF3O95398 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RAPGEF3O95398 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 AC091874.3-201ENST00000512672 1195 ntBASIC32.81■■■□□ 2.84
RAPGEF3O95398 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.81■■■□□ 2.84
RAPGEF3O95398 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RAPGEF3O95398 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.8■■■□□ 2.84
RAPGEF3O95398 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC32.8■■■□□ 2.84
RAPGEF3O95398 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.8■■■□□ 2.84
RAPGEF3O95398 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RAPGEF3O95398 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.8■■■□□ 2.84
RAPGEF3O95398 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.79■■■□□ 2.84
RAPGEF3O95398 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.79■■■□□ 2.84
RAPGEF3O95398 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF3O95398 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.79■■■□□ 2.84
RAPGEF3O95398 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF3O95398 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF3O95398 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF3O95398 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF3O95398 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC32.78■■■□□ 2.84
RAPGEF3O95398 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 AC008694.1-202ENST00000636953 945 ntBASIC32.77■■■□□ 2.84
RAPGEF3O95398 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC32.77■■■□□ 2.84
RAPGEF3O95398 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF3O95398 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF3O95398 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF3O95398 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF3O95398 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF3O95398 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.76■■■□□ 2.83
RAPGEF3O95398 AC026366.1-201ENST00000488803 879 ntBASIC32.76■■■□□ 2.83
RAPGEF3O95398 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF3O95398 CBFB-203ENST00000561924 584 ntTSL 5 BASIC32.76■■■□□ 2.83
RAPGEF3O95398 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.76■■■□□ 2.83
RAPGEF3O95398 AC069236.1-201ENST00000604339 616 ntBASIC32.76■■■□□ 2.83
RAPGEF3O95398 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF3O95398 LINC00543-201ENST00000567234 1845 ntBASIC32.75■■■□□ 2.83
RAPGEF3O95398 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RAPGEF3O95398 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
RAPGEF3O95398 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC32.75■■■□□ 2.83
RAPGEF3O95398 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 MME-217ENST00000616757 1315 ntTSL 5 BASIC32.75■■■□□ 2.83
RAPGEF3O95398 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RAPGEF3O95398 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.74■■■□□ 2.83
RAPGEF3O95398 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC32.74■■■□□ 2.83
RAPGEF3O95398 UNC93B5-201ENST00000530315 699 ntBASIC32.74■■■□□ 2.83
RAPGEF3O95398 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.74■■■□□ 2.83
RAPGEF3O95398 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF3O95398 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.74■■■□□ 2.83
RAPGEF3O95398 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 FAM210CP-201ENST00000445714 574 ntBASIC32.73■■■□□ 2.83
RAPGEF3O95398 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.73■■■□□ 2.83
RAPGEF3O95398 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF3O95398 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
RAPGEF3O95398 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
RAPGEF3O95398 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
RAPGEF3O95398 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
RAPGEF3O95398 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms