Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
BEST1O76090 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.73■■□□□ 1.23
BEST1O76090 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
BEST1O76090 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
BEST1O76090 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
BEST1O76090 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.72■■□□□ 1.23
BEST1O76090 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BEST1O76090 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BEST1O76090 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BEST1O76090 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.72■■□□□ 1.23
BEST1O76090 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.72■■□□□ 1.23
BEST1O76090 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.72■■□□□ 1.23
BEST1O76090 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
BEST1O76090 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.72■■□□□ 1.23
BEST1O76090 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.71■■□□□ 1.23
BEST1O76090 KRT18P5-201ENST00000436075 1291 ntBASIC22.71■■□□□ 1.23
BEST1O76090 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
BEST1O76090 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.71■■□□□ 1.23
BEST1O76090 KRT18P61-201ENST00000585825 1298 ntBASIC22.71■■□□□ 1.23
BEST1O76090 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
BEST1O76090 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BEST1O76090 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.7■■□□□ 1.23
BEST1O76090 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
BEST1O76090 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
BEST1O76090 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.7■■□□□ 1.22
BEST1O76090 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.7■■□□□ 1.22
BEST1O76090 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.7■■□□□ 1.22
BEST1O76090 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.7■■□□□ 1.22
BEST1O76090 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BEST1O76090 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
BEST1O76090 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
BEST1O76090 GUSBP5-202ENST00000510805 1989 ntBASIC22.69■■□□□ 1.22
BEST1O76090 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
BEST1O76090 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 AC009237.3-201ENST00000393279 1427 ntBASIC22.69■■□□□ 1.22
BEST1O76090 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
BEST1O76090 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
BEST1O76090 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.69■■□□□ 1.22
BEST1O76090 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 AC055733.4-201ENST00000638462 1354 ntBASIC22.68■■□□□ 1.22
BEST1O76090 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.68■■□□□ 1.22
BEST1O76090 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.68■■□□□ 1.22
BEST1O76090 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.68■■□□□ 1.22
BEST1O76090 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.68■■□□□ 1.22
BEST1O76090 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.68■■□□□ 1.22
BEST1O76090 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.68■■□□□ 1.22
BEST1O76090 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.68■■□□□ 1.22
BEST1O76090 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BEST1O76090 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
BEST1O76090 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.67■■□□□ 1.22
BEST1O76090 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.67■■□□□ 1.22
BEST1O76090 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
BEST1O76090 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.67■■□□□ 1.22
BEST1O76090 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.67■■□□□ 1.22
BEST1O76090 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
BEST1O76090 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.67■■□□□ 1.22
BEST1O76090 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BEST1O76090 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms