Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNRNP200O75643 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP200O75643 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP200O75643 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP200O75643 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SNRNP200O75643 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.71■□□□□ 0.91
SNRNP200O75643 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP200O75643 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP200O75643 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.71■□□□□ 0.91
SNRNP200O75643 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SNRNP200O75643 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRNP200O75643 GUSBP5-202ENST00000510805 1989 ntBASIC20.7■□□□□ 0.9
SNRNP200O75643 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SNRNP200O75643 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SNRNP200O75643 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.7■□□□□ 0.9
SNRNP200O75643 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.7■□□□□ 0.9
SNRNP200O75643 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.7■□□□□ 0.9
SNRNP200O75643 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.7■□□□□ 0.9
SNRNP200O75643 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.69■□□□□ 0.9
SNRNP200O75643 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNRNP200O75643 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.69■□□□□ 0.9
SNRNP200O75643 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.69■□□□□ 0.9
SNRNP200O75643 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.69■□□□□ 0.9
SNRNP200O75643 AC104564.3-201ENST00000582367 638 ntBASIC20.69■□□□□ 0.9
SNRNP200O75643 AP006587.3-201ENST00000525742 1516 ntBASIC20.69■□□□□ 0.9
SNRNP200O75643 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.69■□□□□ 0.9
SNRNP200O75643 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP200O75643 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNRNP200O75643 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SNRNP200O75643 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNRNP200O75643 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP200O75643 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.68■□□□□ 0.9
SNRNP200O75643 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP200O75643 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRNP200O75643 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP200O75643 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP200O75643 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRNP200O75643 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SNRNP200O75643 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP200O75643 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNRNP200O75643 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.67■□□□□ 0.9
SNRNP200O75643 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRNP200O75643 OXCT2P1-201ENST00000447263 1535 ntBASIC20.67■□□□□ 0.9
SNRNP200O75643 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNRNP200O75643 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
SNRNP200O75643 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRNP200O75643 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SNRNP200O75643 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.66■□□□□ 0.9
SNRNP200O75643 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.66■□□□□ 0.9
SNRNP200O75643 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SNRNP200O75643 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
SNRNP200O75643 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRNP200O75643 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.66■□□□□ 0.9
SNRNP200O75643 AC009237.3-201ENST00000393279 1427 ntBASIC20.66■□□□□ 0.9
SNRNP200O75643 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
SNRNP200O75643 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 AC092053.2-201ENST00000640557 1818 ntBASIC20.66■□□□□ 0.9
SNRNP200O75643 FAM99A-202ENST00000538190 1989 ntBASIC20.66■□□□□ 0.9
SNRNP200O75643 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP200O75643 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.65■□□□□ 0.9
SNRNP200O75643 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SNRNP200O75643 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.65■□□□□ 0.9
SNRNP200O75643 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 AC055733.4-201ENST00000638462 1354 ntBASIC20.65■□□□□ 0.9
SNRNP200O75643 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SNRNP200O75643 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.65■□□□□ 0.9
SNRNP200O75643 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP200O75643 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
SNRNP200O75643 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNRNP200O75643 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.64■□□□□ 0.9
SNRNP200O75643 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.9
SNRNP200O75643 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNRNP200O75643 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP200O75643 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.64■□□□□ 0.89
SNRNP200O75643 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRNP200O75643 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP200O75643 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms