Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PFDN1O60925 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PFDN1O60925 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PFDN1O60925 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN1O60925 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.3■□□□□ 0.68
PFDN1O60925 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.3■□□□□ 0.68
PFDN1O60925 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.3■□□□□ 0.68
PFDN1O60925 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.3■□□□□ 0.68
PFDN1O60925 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PFDN1O60925 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.3■□□□□ 0.68
PFDN1O60925 AC244015.2-201ENST00000616358 1861 ntBASIC19.3■□□□□ 0.68
PFDN1O60925 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PFDN1O60925 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.3■□□□□ 0.68
PFDN1O60925 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN1O60925 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PFDN1O60925 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
PFDN1O60925 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PFDN1O60925 SMG8-203ENST00000578922 2178 ntBASIC19.29■□□□□ 0.68
PFDN1O60925 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.29■□□□□ 0.68
PFDN1O60925 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PFDN1O60925 AC005082.1-201ENST00000413042 2259 ntBASIC19.29■□□□□ 0.68
PFDN1O60925 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.29■□□□□ 0.68
PFDN1O60925 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PFDN1O60925 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.29■□□□□ 0.68
PFDN1O60925 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PFDN1O60925 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
PFDN1O60925 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.28■□□□□ 0.68
PFDN1O60925 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.28■□□□□ 0.68
PFDN1O60925 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PFDN1O60925 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PFDN1O60925 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PFDN1O60925 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
PFDN1O60925 FZD10-202ENST00000539839 3282 ntBASIC19.27■□□□□ 0.68
PFDN1O60925 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.27■□□□□ 0.68
PFDN1O60925 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PFDN1O60925 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PFDN1O60925 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.27■□□□□ 0.67
PFDN1O60925 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PFDN1O60925 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PFDN1O60925 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms