Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.39■■□□□ 1.97
CACNA1FO60840 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CACNA1FO60840 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CACNA1FO60840 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
CACNA1FO60840 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.38■■□□□ 1.97
CACNA1FO60840 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.38■■□□□ 1.97
CACNA1FO60840 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.38■■□□□ 1.97
CACNA1FO60840 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CACNA1FO60840 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CACNA1FO60840 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CACNA1FO60840 GALC-202ENST00000393568 2054 ntTSL 2 BASIC27.37■■□□□ 1.97
CACNA1FO60840 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 GUSBP5-202ENST00000510805 1989 ntBASIC27.37■■□□□ 1.97
CACNA1FO60840 FAM99A-202ENST00000538190 1989 ntBASIC27.37■■□□□ 1.97
CACNA1FO60840 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.37■■□□□ 1.97
CACNA1FO60840 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CACNA1FO60840 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.37■■□□□ 1.97
CACNA1FO60840 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CACNA1FO60840 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.36■■□□□ 1.97
CACNA1FO60840 AP004607.4-201ENST00000530158 1459 ntBASIC27.36■■□□□ 1.97
CACNA1FO60840 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.36■■□□□ 1.97
CACNA1FO60840 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CACNA1FO60840 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.36■■□□□ 1.97
CACNA1FO60840 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.36■■□□□ 1.97
CACNA1FO60840 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.36■■□□□ 1.97
CACNA1FO60840 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CACNA1FO60840 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CACNA1FO60840 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.35■■□□□ 1.97
CACNA1FO60840 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.35■■□□□ 1.97
CACNA1FO60840 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.35■■□□□ 1.97
CACNA1FO60840 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CACNA1FO60840 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.97
CACNA1FO60840 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.35■■□□□ 1.97
CACNA1FO60840 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.35■■□□□ 1.97
CACNA1FO60840 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.35■■□□□ 1.97
CACNA1FO60840 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.34■■□□□ 1.97
CACNA1FO60840 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CACNA1FO60840 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CACNA1FO60840 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CACNA1FO60840 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CACNA1FO60840 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CACNA1FO60840 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.34■■□□□ 1.97
CACNA1FO60840 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.34■■□□□ 1.97
CACNA1FO60840 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.34■■□□□ 1.97
CACNA1FO60840 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CACNA1FO60840 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.34■■□□□ 1.97
CACNA1FO60840 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CACNA1FO60840 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.33■■□□□ 1.97
CACNA1FO60840 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.33■■□□□ 1.97
CACNA1FO60840 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CACNA1FO60840 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 EEF1DP3-203ENST00000566025 782 ntBASIC27.33■■□□□ 1.97
CACNA1FO60840 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.33■■□□□ 1.97
CACNA1FO60840 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CACNA1FO60840 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CACNA1FO60840 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.32■■□□□ 1.96
CACNA1FO60840 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CACNA1FO60840 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.32■■□□□ 1.96
CACNA1FO60840 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CACNA1FO60840 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CACNA1FO60840 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CACNA1FO60840 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.31■■□□□ 1.96
CACNA1FO60840 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.31■■□□□ 1.96
CACNA1FO60840 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
CACNA1FO60840 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CACNA1FO60840 ECEL1P1-201ENST00000373592 1742 ntBASIC27.31■■□□□ 1.96
CACNA1FO60840 AC016769.1-201ENST00000409132 1010 ntBASIC27.31■■□□□ 1.96
CACNA1FO60840 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CACNA1FO60840 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.31■■□□□ 1.96
CACNA1FO60840 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.31■■□□□ 1.96
CACNA1FO60840 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.31■■□□□ 1.96
CACNA1FO60840 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.31■■□□□ 1.96
CACNA1FO60840 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CACNA1FO60840 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CACNA1FO60840 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CACNA1FO60840 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CACNA1FO60840 KRT19P1-201ENST00000405746 1186 ntBASIC27.3■■□□□ 1.96
CACNA1FO60840 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CACNA1FO60840 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.3■■□□□ 1.96
CACNA1FO60840 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.3■■□□□ 1.96
CACNA1FO60840 AC004854.2-201ENST00000608450 1441 ntBASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms