Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEF4O60810 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF4O60810 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF4O60810 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF4O60810 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.8■□□□□ 0.92
PRAMEF4O60810 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PRAMEF4O60810 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF4O60810 AC007375.3-201ENST00000600936 2314 ntBASIC20.79■□□□□ 0.92
PRAMEF4O60810 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF4O60810 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF4O60810 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF4O60810 AC099791.1-201ENST00000416440 715 ntBASIC20.79■□□□□ 0.92
PRAMEF4O60810 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF4O60810 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.79■□□□□ 0.92
PRAMEF4O60810 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEF4O60810 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEF4O60810 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEF4O60810 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF4O60810 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEF4O60810 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF4O60810 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF4O60810 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 EDA-201ENST00000338901 1233 ntBASIC20.77■□□□□ 0.92
PRAMEF4O60810 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEF4O60810 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF4O60810 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF4O60810 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PRAMEF4O60810 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRAMEF4O60810 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.77■□□□□ 0.91
PRAMEF4O60810 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.77■□□□□ 0.91
PRAMEF4O60810 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 MIR939-201ENST00000401314 82 ntBASIC20.76■□□□□ 0.91
PRAMEF4O60810 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 SUDS3P1-201ENST00000505831 966 ntBASIC20.76■□□□□ 0.91
PRAMEF4O60810 AF213884.3-201ENST00000563833 479 ntBASIC20.76■□□□□ 0.91
PRAMEF4O60810 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 AC126544.1-201ENST00000580842 1059 ntBASIC20.76■□□□□ 0.91
PRAMEF4O60810 AL136967.2-201ENST00000623968 743 ntBASIC20.76■□□□□ 0.91
PRAMEF4O60810 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF4O60810 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PRAMEF4O60810 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.75■□□□□ 0.91
PRAMEF4O60810 IGHV3-19-201ENST00000521488 291 ntBASIC20.75■□□□□ 0.91
PRAMEF4O60810 SMUG1P1-201ENST00000590640 811 ntBASIC20.75■□□□□ 0.91
PRAMEF4O60810 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF4O60810 AL139246.5-201ENST00000606645 996 ntBASIC20.75■□□□□ 0.91
PRAMEF4O60810 AL355001.2-201ENST00000620617 1191 ntBASIC20.75■□□□□ 0.91
PRAMEF4O60810 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF4O60810 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF4O60810 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF4O60810 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF4O60810 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF4O60810 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF4O60810 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms