Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PLOD3O60568 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PLOD3O60568 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.26■□□□□ 0.83
PLOD3O60568 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.25■□□□□ 0.83
PLOD3O60568 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PLOD3O60568 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
PLOD3O60568 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PLOD3O60568 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.25■□□□□ 0.83
PLOD3O60568 AL355001.2-201ENST00000620617 1191 ntBASIC20.25■□□□□ 0.83
PLOD3O60568 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PLOD3O60568 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PLOD3O60568 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
PLOD3O60568 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.24■□□□□ 0.83
PLOD3O60568 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 AC027682.1-201ENST00000562846 899 ntBASIC20.24■□□□□ 0.83
PLOD3O60568 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.24■□□□□ 0.83
PLOD3O60568 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.24■□□□□ 0.83
PLOD3O60568 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.24■□□□□ 0.83
PLOD3O60568 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.24■□□□□ 0.83
PLOD3O60568 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PLOD3O60568 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PLOD3O60568 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
PLOD3O60568 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PLOD3O60568 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PLOD3O60568 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
PLOD3O60568 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.23■□□□□ 0.83
PLOD3O60568 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
PLOD3O60568 AP001330.3-201ENST00000520123 633 ntBASIC20.23■□□□□ 0.83
PLOD3O60568 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.23■□□□□ 0.83
PLOD3O60568 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.23■□□□□ 0.83
PLOD3O60568 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PLOD3O60568 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PLOD3O60568 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.22■□□□□ 0.83
PLOD3O60568 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.22■□□□□ 0.83
PLOD3O60568 AC008764.7-201ENST00000593779 1081 ntBASIC20.22■□□□□ 0.83
PLOD3O60568 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 AL031432.3-201ENST00000607698 485 ntBASIC20.22■□□□□ 0.83
PLOD3O60568 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PLOD3O60568 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PLOD3O60568 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PLOD3O60568 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
PLOD3O60568 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PLOD3O60568 OR7E47P-201ENST00000546390 1422 ntBASIC20.21■□□□□ 0.83
PLOD3O60568 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PLOD3O60568 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 MIR939-201ENST00000401314 82 ntBASIC20.21■□□□□ 0.83
PLOD3O60568 AC099791.1-201ENST00000416440 715 ntBASIC20.21■□□□□ 0.83
PLOD3O60568 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.21■□□□□ 0.83
PLOD3O60568 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 AC126544.1-201ENST00000580842 1059 ntBASIC20.21■□□□□ 0.83
PLOD3O60568 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.21■□□□□ 0.83
PLOD3O60568 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PLOD3O60568 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
PLOD3O60568 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PLOD3O60568 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PLOD3O60568 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PLOD3O60568 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PLOD3O60568 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PLOD3O60568 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.2■□□□□ 0.82
PLOD3O60568 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.2■□□□□ 0.82
PLOD3O60568 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PLOD3O60568 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PLOD3O60568 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PLOD3O60568 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PLOD3O60568 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms