Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
GMDSO60547 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.96■□□□□ 0.63
GMDSO60547 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
GMDSO60547 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GMDSO60547 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GMDSO60547 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.95■□□□□ 0.62
GMDSO60547 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GMDSO60547 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.95■□□□□ 0.62
GMDSO60547 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GMDSO60547 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GMDSO60547 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
GMDSO60547 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 AC131281.2-201ENST00000520478 145 ntBASIC18.94■□□□□ 0.62
GMDSO60547 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.94■□□□□ 0.62
GMDSO60547 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.94■□□□□ 0.62
GMDSO60547 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GMDSO60547 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 AC005229.4-201ENST00000610085 2198 ntBASIC18.93■□□□□ 0.62
GMDSO60547 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.93■□□□□ 0.62
GMDSO60547 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GMDSO60547 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GMDSO60547 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 AC099791.2-201ENST00000605725 427 ntBASIC18.93■□□□□ 0.62
GMDSO60547 MIR4466-201ENST00000606121 54 ntBASIC18.93■□□□□ 0.62
GMDSO60547 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GMDSO60547 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.93■□□□□ 0.62
GMDSO60547 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 FAM99A-202ENST00000538190 1989 ntBASIC18.93■□□□□ 0.62
GMDSO60547 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GMDSO60547 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GMDSO60547 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GMDSO60547 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GMDSO60547 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GMDSO60547 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.92■□□□□ 0.62
GMDSO60547 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.92■□□□□ 0.62
GMDSO60547 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 DUX4L19-201ENST00000557448 1267 ntBASIC18.92■□□□□ 0.62
GMDSO60547 AL499627.2-201ENST00000606283 725 ntBASIC18.92■□□□□ 0.62
GMDSO60547 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.92■□□□□ 0.62
GMDSO60547 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GMDSO60547 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.91■□□□□ 0.62
GMDSO60547 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GMDSO60547 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.91■□□□□ 0.62
GMDSO60547 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms