Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NDUFS4O43181 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.64■□□□□ 0.89
NDUFS4O43181 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 AC019069.1-201ENST00000610008 1333 ntBASIC20.64■□□□□ 0.89
NDUFS4O43181 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
NDUFS4O43181 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS4O43181 ZNRF2P3-201ENST00000424200 374 ntBASIC20.64■□□□□ 0.89
NDUFS4O43181 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.64■□□□□ 0.89
NDUFS4O43181 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.64■□□□□ 0.89
NDUFS4O43181 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NDUFS4O43181 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.64■□□□□ 0.89
NDUFS4O43181 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NDUFS4O43181 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NDUFS4O43181 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NDUFS4O43181 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.63■□□□□ 0.89
NDUFS4O43181 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NDUFS4O43181 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.63■□□□□ 0.89
NDUFS4O43181 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 SMUG1P1-201ENST00000590640 811 ntBASIC20.63■□□□□ 0.89
NDUFS4O43181 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.63■□□□□ 0.89
NDUFS4O43181 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NDUFS4O43181 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS4O43181 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS4O43181 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS4O43181 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NDUFS4O43181 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NDUFS4O43181 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.62■□□□□ 0.89
NDUFS4O43181 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
NDUFS4O43181 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
NDUFS4O43181 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 C11orf96-202ENST00000528572 1834 ntBASIC20.62■□□□□ 0.89
NDUFS4O43181 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS4O43181 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFS4O43181 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NDUFS4O43181 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.61■□□□□ 0.89
NDUFS4O43181 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS4O43181 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFS4O43181 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.61■□□□□ 0.89
NDUFS4O43181 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS4O43181 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS4O43181 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
NDUFS4O43181 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NDUFS4O43181 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFS4O43181 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS4O43181 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
NDUFS4O43181 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NDUFS4O43181 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.6■□□□□ 0.89
NDUFS4O43181 AC012414.1-201ENST00000556676 535 ntBASIC20.6■□□□□ 0.89
NDUFS4O43181 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFS4O43181 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFS4O43181 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFS4O43181 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS4O43181 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS4O43181 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.59■□□□□ 0.89
NDUFS4O43181 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.59■□□□□ 0.89
NDUFS4O43181 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NDUFS4O43181 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.59■□□□□ 0.89
NDUFS4O43181 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.59■□□□□ 0.89
NDUFS4O43181 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.59■□□□□ 0.89
NDUFS4O43181 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.59■□□□□ 0.89
NDUFS4O43181 AL354811.1-201ENST00000610286 706 ntBASIC20.59■□□□□ 0.89
NDUFS4O43181 AL358852.1-201ENST00000623174 1268 ntBASIC20.59■□□□□ 0.89
NDUFS4O43181 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS4O43181 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS4O43181 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
NDUFS4O43181 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NDUFS4O43181 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS4O43181 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS4O43181 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms