Protein–RNA interactions for Protein: O15160

POLR1C, DNA-directed RNA polymerases I and III subunit RPAC1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1CO15160 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1CO15160 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1CO15160 KRT18P61-201ENST00000585825 1298 ntBASIC20.73■□□□□ 0.91
POLR1CO15160 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
POLR1CO15160 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
POLR1CO15160 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
POLR1CO15160 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1CO15160 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1CO15160 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
POLR1CO15160 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.72■□□□□ 0.91
POLR1CO15160 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 AC004854.2-201ENST00000608450 1441 ntBASIC20.72■□□□□ 0.91
POLR1CO15160 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
POLR1CO15160 KRT19P1-201ENST00000405746 1186 ntBASIC20.72■□□□□ 0.91
POLR1CO15160 AC006015.1-201ENST00000429970 570 ntBASIC20.72■□□□□ 0.91
POLR1CO15160 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1CO15160 AL024507.2-201ENST00000606070 2574 ntBASIC20.72■□□□□ 0.91
POLR1CO15160 DUSP8P3-201ENST00000399571 1760 ntBASIC20.72■□□□□ 0.91
POLR1CO15160 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1CO15160 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1CO15160 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1CO15160 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
POLR1CO15160 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
POLR1CO15160 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1CO15160 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1CO15160 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1CO15160 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1CO15160 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1CO15160 AC080038.1-201ENST00000611274 1154 ntBASIC20.71■□□□□ 0.91
POLR1CO15160 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
POLR1CO15160 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
POLR1CO15160 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1CO15160 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1CO15160 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1CO15160 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR1CO15160 ID1-201ENST00000376105 1233 ntBASIC20.7■□□□□ 0.9
POLR1CO15160 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.7■□□□□ 0.9
POLR1CO15160 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
POLR1CO15160 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1CO15160 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1CO15160 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1CO15160 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
POLR1CO15160 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
POLR1CO15160 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1CO15160 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.69■□□□□ 0.9
POLR1CO15160 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1CO15160 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1CO15160 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.69■□□□□ 0.9
POLR1CO15160 AC079140.4-201ENST00000507448 529 ntBASIC20.69■□□□□ 0.9
POLR1CO15160 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1CO15160 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1CO15160 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1CO15160 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
POLR1CO15160 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1CO15160 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1CO15160 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.69■□□□□ 0.9
POLR1CO15160 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1CO15160 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1CO15160 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
POLR1CO15160 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR1CO15160 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1CO15160 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1CO15160 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1CO15160 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1CO15160 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1CO15160 C9orf163-202ENST00000624034 2573 ntBASIC20.67■□□□□ 0.9
POLR1CO15160 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1CO15160 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1CO15160 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1CO15160 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1CO15160 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1CO15160 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1CO15160 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1CO15160 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
POLR1CO15160 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR1CO15160 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms