Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNPHO15079 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.17■□□□□ 0.82
SNPHO15079 AC233992.3-201ENST00000607491 485 ntBASIC20.17■□□□□ 0.82
SNPHO15079 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNPHO15079 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNPHO15079 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNPHO15079 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
SNPHO15079 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 SLC47A1P1-202ENST00000449666 945 ntBASIC20.16■□□□□ 0.82
SNPHO15079 AC008764.7-201ENST00000593779 1081 ntBASIC20.16■□□□□ 0.82
SNPHO15079 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.16■□□□□ 0.82
SNPHO15079 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.16■□□□□ 0.82
SNPHO15079 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNPHO15079 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.16■□□□□ 0.82
SNPHO15079 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 AC099791.1-201ENST00000416440 715 ntBASIC20.15■□□□□ 0.82
SNPHO15079 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 RASA4CP-201ENST00000424092 1398 ntBASIC20.15■□□□□ 0.82
SNPHO15079 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SNPHO15079 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNPHO15079 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.15■□□□□ 0.82
SNPHO15079 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.15■□□□□ 0.82
SNPHO15079 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.15■□□□□ 0.82
SNPHO15079 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SNPHO15079 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.14■□□□□ 0.81
SNPHO15079 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
SNPHO15079 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.14■□□□□ 0.81
SNPHO15079 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SNPHO15079 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.14■□□□□ 0.81
SNPHO15079 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.81
SNPHO15079 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.14■□□□□ 0.81
SNPHO15079 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.14■□□□□ 0.81
SNPHO15079 CA15P2-201ENST00000611168 834 ntBASIC20.14■□□□□ 0.81
SNPHO15079 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNPHO15079 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.13■□□□□ 0.81
SNPHO15079 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.13■□□□□ 0.81
SNPHO15079 AC004687.1-201ENST00000579003 1625 ntBASIC20.13■□□□□ 0.81
SNPHO15079 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNPHO15079 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SNPHO15079 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNPHO15079 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNPHO15079 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNPHO15079 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.13■□□□□ 0.81
SNPHO15079 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNPHO15079 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SNPHO15079 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SNPHO15079 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.12■□□□□ 0.81
SNPHO15079 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SNPHO15079 AC092473.1-201ENST00000441098 221 ntBASIC20.12■□□□□ 0.81
SNPHO15079 AC010525.1-201ENST00000585559 441 ntBASIC20.12■□□□□ 0.81
SNPHO15079 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.12■□□□□ 0.81
SNPHO15079 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.12■□□□□ 0.81
SNPHO15079 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNPHO15079 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SNPHO15079 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNPHO15079 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNPHO15079 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SNPHO15079 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SNPHO15079 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNPHO15079 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms