Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012306.2-201ENST00000609350 630 ntBASIC37.53■■■■□ 3.6
CUX2O14529 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
CUX2O14529 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC37.53■■■■□ 3.6
CUX2O14529 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
CUX2O14529 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC37.52■■■■□ 3.6
CUX2O14529 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CUX2O14529 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CUX2O14529 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC37.52■■■■□ 3.6
CUX2O14529 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CUX2O14529 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC37.52■■■■□ 3.6
CUX2O14529 NT5C-211ENST00000582170 653 ntTSL 3 BASIC37.52■■■■□ 3.6
CUX2O14529 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CUX2O14529 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC37.52■■■■□ 3.6
CUX2O14529 AC005224.4-201ENST00000583262 1652 ntBASIC37.52■■■■□ 3.6
CUX2O14529 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC37.52■■■■□ 3.6
CUX2O14529 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC37.52■■■■□ 3.6
CUX2O14529 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
CUX2O14529 MDFI-202ENST00000373050 809 ntTSL 2 BASIC37.52■■■■□ 3.6
CUX2O14529 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC37.52■■■■□ 3.6
CUX2O14529 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC37.52■■■■□ 3.6
CUX2O14529 FAM197Y4-202ENST00000622692 608 ntBASIC37.52■■■■□ 3.6
CUX2O14529 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC37.51■■■■□ 3.6
CUX2O14529 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC37.51■■■■□ 3.59
CUX2O14529 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC37.51■■■■□ 3.59
CUX2O14529 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC37.51■■■■□ 3.59
CUX2O14529 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
CUX2O14529 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC37.51■■■■□ 3.59
CUX2O14529 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC37.51■■■■□ 3.59
CUX2O14529 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC37.51■■■■□ 3.59
CUX2O14529 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC37.51■■■■□ 3.59
CUX2O14529 AC145676.1-201ENST00000514988 2004 ntBASIC37.5■■■■□ 3.59
CUX2O14529 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC37.5■■■■□ 3.59
CUX2O14529 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
CUX2O14529 KRT18P20-201ENST00000548986 1279 ntBASIC37.5■■■■□ 3.59
CUX2O14529 AC097493.4-201ENST00000641197 219 ntBASIC37.5■■■■□ 3.59
CUX2O14529 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC37.49■■■■□ 3.59
CUX2O14529 RPPH1-201ENST00000516869 333 ntBASIC37.49■■■■□ 3.59
CUX2O14529 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC37.49■■■■□ 3.59
CUX2O14529 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC37.49■■■■□ 3.59
CUX2O14529 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
CUX2O14529 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CUX2O14529 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC37.48■■■■□ 3.59
CUX2O14529 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC37.48■■■■□ 3.59
CUX2O14529 AC068587.7-201ENST00000641602 218 ntBASIC37.48■■■■□ 3.59
CUX2O14529 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC37.48■■■■□ 3.59
CUX2O14529 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC37.48■■■■□ 3.59
CUX2O14529 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CUX2O14529 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC37.47■■■■□ 3.59
CUX2O14529 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC37.47■■■■□ 3.59
CUX2O14529 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC37.46■■■■□ 3.59
CUX2O14529 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
CUX2O14529 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC37.46■■■■□ 3.59
CUX2O14529 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC37.45■■■■□ 3.59
CUX2O14529 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC37.45■■■■□ 3.59
CUX2O14529 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CUX2O14529 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC37.45■■■■□ 3.59
CUX2O14529 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC37.45■■■■□ 3.59
CUX2O14529 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
CUX2O14529 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CUX2O14529 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC37.45■■■■□ 3.59
CUX2O14529 AC010141.2-201ENST00000452426 721 ntBASIC37.45■■■■□ 3.59
CUX2O14529 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC37.45■■■■□ 3.59
CUX2O14529 AC008403.3-201ENST00000598924 454 ntBASIC37.45■■■■□ 3.59
CUX2O14529 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC37.44■■■■□ 3.58
CUX2O14529 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
CUX2O14529 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CUX2O14529 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CUX2O14529 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC37.44■■■■□ 3.58
CUX2O14529 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC37.44■■■■□ 3.58
CUX2O14529 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
CUX2O14529 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
CUX2O14529 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CUX2O14529 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC37.43■■■■□ 3.58
CUX2O14529 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC37.43■■■■□ 3.58
CUX2O14529 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC37.43■■■■□ 3.58
CUX2O14529 PLLP-204ENST00000569059 665 ntTSL 3 BASIC37.43■■■■□ 3.58
CUX2O14529 CYP2T3P-201ENST00000601990 817 ntBASIC37.43■■■■□ 3.58
CUX2O14529 AC069236.1-201ENST00000604339 616 ntBASIC37.43■■■■□ 3.58
CUX2O14529 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC37.43■■■■□ 3.58
CUX2O14529 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
CUX2O14529 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC37.42■■■■□ 3.58
CUX2O14529 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CUX2O14529 TERF1P5-201ENST00000477545 1207 ntBASIC37.42■■■■□ 3.58
CUX2O14529 C2orf69P4-201ENST00000565394 541 ntBASIC37.42■■■■□ 3.58
CUX2O14529 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC37.42■■■■□ 3.58
CUX2O14529 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CUX2O14529 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CUX2O14529 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CUX2O14529 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
CUX2O14529 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC37.41■■■■□ 3.58
CUX2O14529 AC133561.5-201ENST00000635547 218 ntBASIC37.41■■■■□ 3.58
CUX2O14529 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC37.41■■■■□ 3.58
CUX2O14529 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC37.41■■■■□ 3.58
CUX2O14529 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CUX2O14529 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC37.41■■■■□ 3.58
CUX2O14529 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CUX2O14529 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CUX2O14529 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
CUX2O14529 SHF-207ENST00000560540 2062 ntTSL 5 BASIC37.4■■■■□ 3.58
CUX2O14529 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC37.4■■■■□ 3.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms