Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM23A6NLE4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 HSD17B1P1-201ENST00000590052 955 ntBASIC21.98■■□□□ 1.11
SMIM23A6NLE4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.98■■□□□ 1.11
SMIM23A6NLE4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM23A6NLE4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM23A6NLE4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.95■■□□□ 1.1
SMIM23A6NLE4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 AC004987.1-201ENST00000428627 508 ntBASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM23A6NLE4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 DUX4L4-201ENST00000566884 1269 ntBASIC21.94■■□□□ 1.1
SMIM23A6NLE4 CA15P2-201ENST00000611168 834 ntBASIC21.94■■□□□ 1.1
SMIM23A6NLE4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 AC005703.6-201ENST00000623265 1329 ntBASIC21.94■■□□□ 1.1
SMIM23A6NLE4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM23A6NLE4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms