Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.81■■□□□ 1.08
CAPN8A6NHC0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN8A6NHC0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN8A6NHC0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN8A6NHC0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 LINC00526-201ENST00000581067 1875 ntBASIC21.8■■□□□ 1.08
CAPN8A6NHC0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN8A6NHC0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.8■■□□□ 1.08
CAPN8A6NHC0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 IRS3P-201ENST00000223076 1006 ntBASIC21.79■■□□□ 1.08
CAPN8A6NHC0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 AC079089.2-201ENST00000531211 1277 ntBASIC21.79■■□□□ 1.08
CAPN8A6NHC0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN8A6NHC0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 AC087623.3-201ENST00000607047 1098 ntBASIC21.78■■□□□ 1.08
CAPN8A6NHC0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN8A6NHC0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN8A6NHC0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 AC105233.4-201ENST00000642045 216 ntBASIC21.76■■□□□ 1.07
CAPN8A6NHC0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN8A6NHC0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 AC012414.1-201ENST00000556676 535 ntBASIC21.75■■□□□ 1.07
CAPN8A6NHC0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN8A6NHC0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.74■■□□□ 1.07
CAPN8A6NHC0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms