Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17■□□□□ 0.31
RBFOX3A6NFN3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17■□□□□ 0.31
RBFOX3A6NFN3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RBFOX3A6NFN3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RBFOX3A6NFN3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.98■□□□□ 0.31
RBFOX3A6NFN3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 AL020996.1-203ENST00000536896 2307 ntBASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 AL592295.1-201ENST00000400984 884 ntBASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 CR559946.2-201ENST00000623684 991 ntBASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 LINC01960-201ENST00000563759 1884 ntBASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RBFOX3A6NFN3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.96■□□□□ 0.31
RBFOX3A6NFN3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.96■□□□□ 0.3
RBFOX3A6NFN3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 AC087289.5-201ENST00000586076 3175 ntBASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 AC060814.1-201ENST00000554326 538 ntBASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms