Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.42■□□□□ 0.54
MEIS3P1A6NDR6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.42■□□□□ 0.54
MEIS3P1A6NDR6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MEIS3P1A6NDR6 AC092667.1-201ENST00000434301 2586 ntBASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 FP325331.1-202ENST00000623531 1380 ntBASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MEIS3P1A6NDR6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MEIS3P1A6NDR6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MEIS3P1A6NDR6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
MEIS3P1A6NDR6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC010980.1-201ENST00000587192 1142 ntBASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.39■□□□□ 0.53
MEIS3P1A6NDR6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MEIS3P1A6NDR6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MEIS3P1A6NDR6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MEIS3P1A6NDR6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms