Protein–RNA interactions for Protein: A1A4G5

LNP1, Leukemia NUP98 fusion partner 1, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1A1A4G5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LNP1A1A4G5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LNP1A1A4G5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 AL158047.1-201ENST00000445918 881 ntBASIC21.09■□□□□ 0.97
LNP1A1A4G5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 AC007322.4-201ENST00000509611 723 ntBASIC21.09■□□□□ 0.97
LNP1A1A4G5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LNP1A1A4G5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
LNP1A1A4G5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LNP1A1A4G5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LNP1A1A4G5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LNP1A1A4G5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LNP1A1A4G5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LNP1A1A4G5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.08■□□□□ 0.97
LNP1A1A4G5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LNP1A1A4G5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LNP1A1A4G5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LNP1A1A4G5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.08■□□□□ 0.97
LNP1A1A4G5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.08■□□□□ 0.97
LNP1A1A4G5 AC016405.3-201ENST00000607710 860 ntBASIC21.08■□□□□ 0.97
LNP1A1A4G5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.08■□□□□ 0.97
LNP1A1A4G5 AC008694.1-202ENST00000636953 945 ntBASIC21.08■□□□□ 0.97
LNP1A1A4G5 AC142381.3-201ENST00000568208 1670 ntBASIC21.08■□□□□ 0.96
LNP1A1A4G5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LNP1A1A4G5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LNP1A1A4G5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.08■□□□□ 0.96
LNP1A1A4G5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LNP1A1A4G5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 RPS2P4-201ENST00000476944 856 ntBASIC21.07■□□□□ 0.96
LNP1A1A4G5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LNP1A1A4G5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LNP1A1A4G5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 AL512625.2-201ENST00000417533 625 ntBASIC21.06■□□□□ 0.96
LNP1A1A4G5 BX276092.2-201ENST00000417668 665 ntBASIC21.06■□□□□ 0.96
LNP1A1A4G5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 AC069236.1-201ENST00000604339 616 ntBASIC21.06■□□□□ 0.96
LNP1A1A4G5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 MYC-209ENST00000641252 345 ntBASIC21.06■□□□□ 0.96
LNP1A1A4G5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LNP1A1A4G5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LNP1A1A4G5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LNP1A1A4G5 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.06■□□□□ 0.96
LNP1A1A4G5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LNP1A1A4G5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 AC006058.3-201ENST00000606217 1069 ntBASIC21.05■□□□□ 0.96
LNP1A1A4G5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LNP1A1A4G5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.05■□□□□ 0.96
LNP1A1A4G5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 AC142381.4-202ENST00000563973 229 ntBASIC21.04■□□□□ 0.96
LNP1A1A4G5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LNP1A1A4G5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LNP1A1A4G5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LNP1A1A4G5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms